Gene Sbal_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_2404 
Symbol 
ID4845458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp2793541 
End bp2794773 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content52% 
IMG OID640119627 
ProductLolC/E family lipoprotein releasing system, transmembrane protein 
Protein accessionYP_001050766 
Protein GI126174617 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID[TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.041887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCAG GATTTCCTTT CTATATTGGT TACCGTTATT GGCGGGCCAG AAAAGCGAAC 
GCGTTCGCGT CGTTCATTAC TCTATTTGCC GTTTCGGGCA TTTTTTTAGG CGTTGCCGCG
CTCATTGTCG TGAGCTCTGT GATGAATGGT CTCGAAGGCC AACTCAAGCA ACGTATCTTA
GGCGCAGTAC CGCAATTAAC TGTTTATAGT GAAGCGCCTT TAGTCGATTG GACTGAGCAG
GCGAGTGCGC TTAAAGCCTT ACCTGGCGTA TTAGGCGTGA CGCCGAGCGT GTCGACGCAG
GCCATGGTGC AATCGGCGGC GAGTATTCGT GCTGTACAGG TTTATGGCGT GTTCCCCGAG
TTAGCGGAAA AGTTATCTTC GGTTGCCCAG CACACTTACT CAGGTGCATT TGAACAGCTG
ACGAGCGGCG ACTACAAGGT GATTTTGGGC TCTGAGCTGG CAAGGCAACT TAAAGTCGCC
CCCGGTGATA CGGTGCGATT ATTGAGTGGC GATGGTGTGG TGTATTCTCC CTTAGGCCCA
GTGCCGAGCC AACGTAAGTT TTTAGTCTCA GGCATTTTTG AAATGGGCTC TCAGGTCGAT
GCGGGCGTGG CGTATATCCA TTATCAAGAT GCGAAACGGC TGATGCGCCA ACCCAGTGAG
GCTATTGATC AGCTTAGACT CTATTTAGCC GATCCCTTTA GCGCACCTGC TTTAGCGCCT
AAAGTGCAGG ATATATTAGC TAAACAAGGT GTTAAGGCGA CAACCAGCGA TTGGCGTGAT
ACCTATGGCC ACTTGTTTGG CGCGGTCAAG ATGGAAAAGA ACATGATGTC GCTGATGTTG
AGTCTGATTG TGGCCGTTGC CGCATTCAAT ATCGTCTCGG CGCTGGTCAT GATGGTGGTC
GATAAAACCA CAGATGTGGC GGTGCTCAAA ACTCAAGGCG TGACCACGCC CGCCGTGATG
GGCATTTTTG TGGTGCAAGG GTCGCTCAAT GCAGTGCTCG GTTTAGTGCT GGGGCTGGCG
GTTGGGATAC TCATCACCTT GAATCTGAAT GGCATTATGA CCACCTTAGG GATTTCTATT
TTAGGTGTGG GGCAGAGCTT GCCGGTGAAA TTGGAGTTGA TGCAGTTGTC TGTGATCGTG
ATTGGTACGC TACTGGTGAC CCTGCTGGCG ACCTTATATC CCGCACTGCG CGCCGCCAAT
GTGCAACCCG CGACTGCGCT CAGGTACGAG TAA
 
Protein sequence
MNPGFPFYIG YRYWRARKAN AFASFITLFA VSGIFLGVAA LIVVSSVMNG LEGQLKQRIL 
GAVPQLTVYS EAPLVDWTEQ ASALKALPGV LGVTPSVSTQ AMVQSAASIR AVQVYGVFPE
LAEKLSSVAQ HTYSGAFEQL TSGDYKVILG SELARQLKVA PGDTVRLLSG DGVVYSPLGP
VPSQRKFLVS GIFEMGSQVD AGVAYIHYQD AKRLMRQPSE AIDQLRLYLA DPFSAPALAP
KVQDILAKQG VKATTSDWRD TYGHLFGAVK MEKNMMSLML SLIVAVAAFN IVSALVMMVV
DKTTDVAVLK TQGVTTPAVM GIFVVQGSLN AVLGLVLGLA VGILITLNLN GIMTTLGISI
LGVGQSLPVK LELMQLSVIV IGTLLVTLLA TLYPALRAAN VQPATALRYE