Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_2402 |
Symbol | |
ID | 4845456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 2791444 |
End bp | 2792694 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640119625 |
Product | LolC/E family lipoprotein releasing system, transmembrane protein |
Protein accession | YP_001050764 |
Protein GI | 126174615 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0366774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGAC CGTTAGCCTT ATCTATTGGT TGGCGTTTTT ATCGCGCCCG CCAATCCAAC AGCTTTATTA GCTTTATTTC CTTCGCATCG ACTGCGGGCA TCGCCTTAGG CGTGGCGGTA TTGATCATCG TCTTGTCGGC AATGAATGGT TTTGAGCGCG AGTTAGAACA TAGATTGCTT GGCGTCGTGC CGCAGGCGGA CATAGTTGGC GTGAGCGAGC CTATCGCGAA CTGGCAGAGT GTTGCCGAGG GGGCGCTGTT AATTGACGGT ATTCGCGGCG CGGCGCCTTT TATCCGCATG CAAGGTTTAG TGCAAAAGCC CGGCGGTTTT CAAGGTTTAG CTGTCGTGGG GATCGATCCA AAAGAAGAAA TCAAGGTCTC GACACTGGCG CAATTTATGA GCGATGCCAG CTGGCAGAGT CTAGGCCAAG ATGAGAATAA CATCGTCCTT GGGCAGAGTT TGTTGACCAA GTTGGGGCTT GAGGTTGGCG ATACGCTGGC GTTATATGTG CAGGATATGG ATCCAGAAGC GGCGGGCAGT TTACGCGCGG CGAAGAGCCA TCGTTTTGTG GTGTCTGGCG CCTATAATCT TGGCGGCGAG CTTGAGCTGA CCACGGCTTA TATTCCTATG CAGTACGCGG CGCAGATTTT GAACATGAAG AGCGGCGTGA CTGGCGTGCG TATTAGCGTC GATAAAGTGT TTGATGCGCC CGTCAAAGTG CGCGAGCTTG GTTATGCGCA AAAGCAGTCG GTGTATATCA GTGACTGGAC CCGTACCCAA GGGCATTTAT ATCAAGATAT TCAGTTGGTT CGCACAGTCA TGTACTTAGT GCTTGTGCTG GTGATTGGTG TCGCCTGCTT TAATATCGTT TCCACCTTAG TGATGGCGGT GCGGGATAAA GCCTCTGAGA TTGCAATTTT GATGACTATG GGCCTGAGCC GCCTTGCTGT GATGGGGATT TTCATGGTGC AGGGCGCCTT GAATGGTCTG CTTGGCTGTG GTCTTGGTGG GATTATTGGC GTGAGTGTGG CACTGAATTT AAGTGCGATT GCCAGTACGA TGGAGCAGTT ACTCGGTATT CAACTGCTGT CAGCCGATGT GTACTTTGTC GACTTTTTAC CGTCTGAGTT ACATGGCTCA GATGCGGTGT TGGTGATTGT GATGGCGTTT GTGATGAGCT TAATCGCCAC GCTCTATCCT GCTTGGAAAG CCAGTCAGAT TGCGCCAGCG CAAGCCTTAG CGGGGAGATA A
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Protein sequence | MKGPLALSIG WRFYRARQSN SFISFISFAS TAGIALGVAV LIIVLSAMNG FERELEHRLL GVVPQADIVG VSEPIANWQS VAEGALLIDG IRGAAPFIRM QGLVQKPGGF QGLAVVGIDP KEEIKVSTLA QFMSDASWQS LGQDENNIVL GQSLLTKLGL EVGDTLALYV QDMDPEAAGS LRAAKSHRFV VSGAYNLGGE LELTTAYIPM QYAAQILNMK SGVTGVRISV DKVFDAPVKV RELGYAQKQS VYISDWTRTQ GHLYQDIQLV RTVMYLVLVL VIGVACFNIV STLVMAVRDK ASEIAILMTM GLSRLAVMGI FMVQGALNGL LGCGLGGIIG VSVALNLSAI ASTMEQLLGI QLLSADVYFV DFLPSELHGS DAVLVIVMAF VMSLIATLYP AWKASQIAPA QALAGR
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