| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2294 |
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| Symbol | |
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| ID | 4843287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 2668932 |
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| End bp | 2670668 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640119519 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001050658 |
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| Protein GI | 126174509 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.879055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAA ACGTAGCGGA TCATCTAGTC GAAATGCTAG TAGAAGCGGG TGTTAAGCGA
GTTTATGCCG TGACTGGCGA TAGTCTTAAT CCGGTCAATG ATGCTGTACG AAGGGATGGC
AGATTGCAAT GGATCCATGT CAGACACGAG GAAGCTGGCG CTTATGCGGC TTCTATGGAA
GCTGAGCTAA ATGGTATAGG TTGCTGCATG GGTAGCAGTG GTCCTGGGCA TGTTCATTTA
GTCAATGGAC TCTATGATGC CAATAGAGCT GAAAATCCCG TTATTGCGAT TGCTTCAACT
ATCCATACTG AAAAAATGGG ATTAGATAAT TTTCAAGAGA CAAGACCCGA GTCGTTATTT
CAAGATTGTT CAAAATATGT GTTTCTCGCC AATACGCCTA AACAAGCTGT CAATGGTTTA
CAAACGGCGA TTCAGCATGC CATCAGCAAG AAAGGGGTCG CTGTGCTCGG GCTTCCCGGT
GATGTGGCTT CAGCAAGTCT AGAATCTGTG CATACGGCTA ATAAAAATTT CTATACCCAA
CCCAGAATAA CCCCAAGCCA TAAACAGCTT CAAGAATTGG CAAGCGTCAT TAATCAACAT
GAAAAAGTGA TGCTGTTTTG CGGCCATGGT TGTCGCTATG CCGTTGAAGA AGTGATGGCA
TTGGCCAAAA GGCTTAATGC CCCTTTGGGA TATAGCTTTC GAGGCAAAAT ATTTTTTGAA
CGTAAAGAAA ATCCTTATGC CGTTGGATTA AATGGGCTGT TAGGCAATAA ATCCGGTTTT
GAAGCCATGC ATCAAGCCGA TGTCCTGTTG ATGCTGGGCA CGGATTTTCC TTATAGTGAG
TTCCTTCCCG AAAAATGCAA AATTATTCAA GTCGATACTA AACCCGAAAA ATTAGGTCGT
AGAGCTAAAG TGGATTTTGG CTATTGTGGT GATATTAAAT CAACCCTTGA AGATCTCATG
CCGTTAATCA ATGCCAAAAC ATCCACGGAT TTTCTCGACA AAACCCGTTC ACTGCACCAA
GAAATTGAAG CTATCTATGA GAGCTATGTG GAAGAAAAGG GCTCCGAAAA AAATATTCAC
CCAGAATATG TTGCCTATTT GGTGGATAAA CTCGCCGATG ACGATGCGAT ATTTACCGTT
GATACGGGGA TGAGCGCCGT GTGGGCCGCG CGTTATTTAA AGGCGGGAGC CAATCGCTAT
CTGACCGGTT CCTTCAATCA TGGCTCGATG GCGAATGCCA TGCCTATGGC GATGGGGGCT
GGTTTATCAC AACCAGACAG GCAAGTGATT GCGTTTTGCG GTGATGGCGG TATTTCAATG
CTGCTCGGCG ATTTAATGAC CATTAGCCAA TATCAAATTC CTGTCAAAAT CATCATCTTT
AACAATCGTT CGTTAGCCAT GGTGAAACTT GAAATGCGGG TCGAAGGTTA TATGGAGTGG
CAGACGGATA TGGTTAATCC TGATTTTATA AAATTAGCAG AGGCGATGAA CATTGCTGCA
TGGGAGGCGA CGGAGTCCAA AGATGTGGAA CTCGCACTGG TAAATGGATT CAAGCATAAG
GGACCTGCGA TAATCAATAT TTTTACTGAT CCCAATGCCC TGGCAATGCC ACCCACCCTA
AACTTCGAAC AAGTAAAAGG CTTTGTAGCA TCGATGACAA AATTAATGGT CAATGGAAAA
TTTGCCGAAA TCGTCGATAC CACTAAGAAC GATTTAAAAT ACTTACGGGA GTTATGA
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| Protein sequence | MSKNVADHLV EMLVEAGVKR VYAVTGDSLN PVNDAVRRDG RLQWIHVRHE EAGAYAASME
AELNGIGCCM GSSGPGHVHL VNGLYDANRA ENPVIAIAST IHTEKMGLDN FQETRPESLF
QDCSKYVFLA NTPKQAVNGL QTAIQHAISK KGVAVLGLPG DVASASLESV HTANKNFYTQ
PRITPSHKQL QELASVINQH EKVMLFCGHG CRYAVEEVMA LAKRLNAPLG YSFRGKIFFE
RKENPYAVGL NGLLGNKSGF EAMHQADVLL MLGTDFPYSE FLPEKCKIIQ VDTKPEKLGR
RAKVDFGYCG DIKSTLEDLM PLINAKTSTD FLDKTRSLHQ EIEAIYESYV EEKGSEKNIH
PEYVAYLVDK LADDDAIFTV DTGMSAVWAA RYLKAGANRY LTGSFNHGSM ANAMPMAMGA
GLSQPDRQVI AFCGDGGISM LLGDLMTISQ YQIPVKIIIF NNRSLAMVKL EMRVEGYMEW
QTDMVNPDFI KLAEAMNIAA WEATESKDVE LALVNGFKHK GPAIINIFTD PNALAMPPTL
NFEQVKGFVA SMTKLMVNGK FAEIVDTTKN DLKYLREL
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