Gene Sbal_2262 details

Gene Information

• Locus tag: Sbal_2262
• Symbol: rnfD
• ID: 4844577
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 2620656
• End bp: 2621705
• Gene Length: 1050 bp
• Protein Length: 349 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640119488
• Product: electron transport complex protein RnfD
• Protein accession: YP_001050627
• Protein GI: 126174478
• COG category: [C] Energy production and conversion
• COG ID: [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD
• TIGRFAM ID: [TIGR01946] electron transport complex, RnfABCDGE type, D subunit

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00632091
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGTTTA AAATAGCCTC ATCACCCCAT GTAACGCGTA ACTTGCATAC CTCAACGGTC 
ATGCAAAGGG TGATTTTATG TTTACTGCCG GGCCTTGTCG TGCAATGTGC CTTTTTTGGC 
TGGGGCACAC TTGTGCAAGT CCTGCTGGCG ATCCTCGTCG CCTTAAGCTG CGAAGCCGCT 
GTGATGAAAC TTCGCAATCG CAATATCAAA GCGAGCCTTA GCGATAACAG CGCCATGCTC 
ACCGCCATCT TAATTGGTGT CGCCATTCCG CCCCTCGCCC CTTGGTGGAT GATCGTCATG 
GGCACCGCCT TTGCGATCGT CATAGTTAAG CACCTCTACG GCGGCTTAGG CCATAACCTA 
TTCAACCCAG CAATGGCGGC ATATGTATTG CTGTTAGTCT CGTTCCCTGT GCAAATGACC 
TCCTGGATAG CACCGAGCAC CGTTGCACTG CATTCACCCT GCCTTGTTGA AAGCTTGCAA 
CTTATCTTCA ATGTTGGCGC GCACGTGAAT ATGGAGCAGT TCCGTTTAGG CATTGATGGC 
ATGACAATGG CGACGCCACT CGATACCCTC AAAACCGATT TATCCATGGG ATTAACCACC 
ACAGAAAGTC TCACCAAAGC CATTTTTGAT GGCAGTACAG GCGTAGGTTG GTTCTGGGTG 
AACTTGGCCT ATCTTGCTGG CGGGTTAGTG TTACTTAAAC TAAAAGCCAT TCGCTGGCAC 
ATCAGCACTG GCGTGTTATT AGGGCTCTTT GTGGCATCGA GTATCGGTTT CTTACTGTCA 
CCCGATACCC AAGCCAGTCC ACTGATGCAT CTGTTTTCTG GCGCGACCAT GTTAGCGGCG 
TTTTTTATCG CCACTGATCC CGTTACAGCC GCAACCAGCC CCCGTGGCCG TATTATCTTC 
GGCGCGTTAA TTGGTGTGTT GGTGTATATC ATCCGCACGA AAGGCGGTTA CCCTGACGCC 
TTCGCCTTTG CCGTGTTACT GGCCAACCTC TGTGCGCCCT TTATTGACTA TTACGTGCGT 
CCACGCACCT ATGGCCATTC AACGAGCTAA 

 

Protein sequence

MAFKIASSPH VTRNLHTSTV MQRVILCLLP GLVVQCAFFG WGTLVQVLLA ILVALSCEAA 
VMKLRNRNIK ASLSDNSAML TAILIGVAIP PLAPWWMIVM GTAFAIVIVK HLYGGLGHNL 
FNPAMAAYVL LLVSFPVQMT SWIAPSTVAL HSPCLVESLQ LIFNVGAHVN MEQFRLGIDG 
MTMATPLDTL KTDLSMGLTT TESLTKAIFD GSTGVGWFWV NLAYLAGGLV LLKLKAIRWH 
ISTGVLLGLF VASSIGFLLS PDTQASPLMH LFSGATMLAA FFIATDPVTA ATSPRGRIIF 
GALIGVLVYI IRTKGGYPDA FAFAVLLANL CAPFIDYYVR PRTYGHSTS