Gene Sbal_2258 details

Gene Information

• Locus tag: Sbal_2258
• ID: 4843286
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 2614772
• End bp: 2616676
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640119484
• Product: diguanylate cyclase/phosphodiesterase
• Protein accession: YP_001050623
• Protein GI: 126174474
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2200] FOG: EAL domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000255268
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCATGT CAAAATCATA TCCAGTTTTT TTACTGATTA TTTTCTTAGG TCTCTTTGCT 
TGGGTGTATC AAAGCGAAAA CAGCCAATTG CAAGTCCAAC AGCAGCAAGA ACTCGATAGC 
TTTAAATCTA GCTTAAGCCG CTACCAACAA TGGCAGGGTA ACGGTGTAGA ACTCTTTAAA 
AAACTTTCTG AAAACTACTC ATTCCAGTTC TTCCAATATA TTGATGATAC CGACGGCCAA 
CTGAGCCATA CCGAAGGAAG CTTAGACAGT CAACATCCCC ACCCTTTAGC GAGTCTATTT 
TCCATCGAGC TCAGCCACAC ACAAAAATTG GCAGCGGGTC GTTTACAGGT CAAGCTCAGT 
GCAAACCAAG CGATTGATAC TGCAATTAGT AACACTCAAA AACTCGGTGC CATGTTGCTA 
GTGACTTACC TTATTTTGCT ATTAGTGTTT ATTCTATTAA TGTCAAAACA TAGGGCTGCG 
GTACGTTATG CTGCTGATTA TATTTCAAAA ATACCAGAAT TAGGCTTTTC TGCCGTCGCA 
TCATCGAAAC TCACAGGCGA ACTCACCCCT ATTGGTATCT CCCTAGAAGA ATGTCGCCTG 
CAACTTAAAG CCCAAATTGA TAAGCTCAAT CAAGAAAATG AAAAACTGCA TAAAGCTGCC 
TATCAAGATG CCGTCACAGG TTTTGGTAGT CGCCAACGTT TCACCCAAAA ATTAGAAACC 
ATTAGTCATC CCGATGTTCC TCAACTTGGG CTGATGGCAA TGGTTAAAGC GACCGAGCTG 
ACCCTCATTA ATCAAAAACA AGGCCGTTCT GCGGGTGATG ATTATCTTTC CAGTGTGGCC 
AATTGCATCC GCAAAGCCTG TAGCCAATAT GCAGATGCTG AATGTTTTAG GGTATCGAGT 
GCCGATTTTG CGGTGTTTAT TCCCGATGTC ATGCTAAAAG ATGCACCGAA ATTTTTAGAC 
CAGTTAAAAA TTTACCTCGA TGAATATCAG CAGATGACGA GTGCAGAATC CGTCGCCCAT 
ATAGGCTTAG TACCCTATCG CCAAGGTACC GAAGCGGTAA ATTTACTGAC AATTGCCGAT 
ACCGCGGTCA GCATAGCTCA GACCCTTGGC CCCAATAGCT ATCACATCCA AGAGAAACTC 
AATGGGGATG AGCAGTTTGG TGACGATCGT TGGAAGATGG CAATCCATGA TTTAGTGACA 
CGCCAAGCAT TGAAATTCTA CCAGCAGCCT ATTCAGCCGT GTCGTACCGA TGTAGAAGTT 
TACCGTGAGT TGTTGGCGCG CTTTTACAAT AGCGAAGGTA AGTTCTTGCC CACCACCACA 
GTGATTGCTA TGGCTGAACG TCACGGTATG AGTTCGGAAT TGGATAAACT GGTCGTGATC 
AGTGCATTAA AGATACTTAA AGAAAACCCG ACTATTACCG GTAACTTTGG TATCAATATC 
AGCGCATTTT CAGCCCATCA AGACATGTTT GTCGCTTGGC TGAAAGATAT ATTAGGTAAG 
CAAAAATACA TAGCCTCGCG TTTAGTCTTT GAGATCAATG AGTCCGGCAT GCAGTCTAAC 
TTAGGGGCGA GTTATAAATT TGTCCGCGAA GTGCACAGTG TCGGTTCACG AGTGTCGATT 
GAGCGTTTTG GCATGAGCTT TACCTCCTTC AAATTCTTCA GCGAAGTGCG CCCCGACTTC 
ATAAAGCTCG ATGGCAGCTA CACGTCTAAC ATCGATGAAG ACAGCAACAA TAAGTTCTTC 
GTACGTATGA TGGTGGATGT CGCCAGACGA ATTGGCATTC GGGTCATCGC AACCAGTGTC 
GAACGCCAAG AAGAAAAATT AACCCTCGAA AAACTCTTAG TCGATGGATT GCAGGGCTAT 
TACATCGCAC AACCCCAAGC CATGGCCATT ACAGATCAGA TTTAA 

 

Protein sequence

MTMSKSYPVF LLIIFLGLFA WVYQSENSQL QVQQQQELDS FKSSLSRYQQ WQGNGVELFK 
KLSENYSFQF FQYIDDTDGQ LSHTEGSLDS QHPHPLASLF SIELSHTQKL AAGRLQVKLS 
ANQAIDTAIS NTQKLGAMLL VTYLILLLVF ILLMSKHRAA VRYAADYISK IPELGFSAVA 
SSKLTGELTP IGISLEECRL QLKAQIDKLN QENEKLHKAA YQDAVTGFGS RQRFTQKLET 
ISHPDVPQLG LMAMVKATEL TLINQKQGRS AGDDYLSSVA NCIRKACSQY ADAECFRVSS 
ADFAVFIPDV MLKDAPKFLD QLKIYLDEYQ QMTSAESVAH IGLVPYRQGT EAVNLLTIAD 
TAVSIAQTLG PNSYHIQEKL NGDEQFGDDR WKMAIHDLVT RQALKFYQQP IQPCRTDVEV 
YRELLARFYN SEGKFLPTTT VIAMAERHGM SSELDKLVVI SALKILKENP TITGNFGINI 
SAFSAHQDMF VAWLKDILGK QKYIASRLVF EINESGMQSN LGASYKFVRE VHSVGSRVSI 
ERFGMSFTSF KFFSEVRPDF IKLDGSYTSN IDEDSNNKFF VRMMVDVARR IGIRVIATSV 
ERQEEKLTLE KLLVDGLQGY YIAQPQAMAI TDQI