| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2256 |
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| Symbol | |
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| ID | 4843658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2609992 |
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| End bp | 2610555 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640119478 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001050621 |
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| Protein GI | 126174472 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.18089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGTCTGA TATGTGCGGG TTTGTATGTC GCAGGCTTAG CCAGTCCTGC TGTCGACAAC
CTGCTCGCCT ATCGCCGCAG TGCTATTGCT GATGGTGAAT GGTGGCGCTT AATCAGCGGT
AATTTATTGC ACACGAATCA GTGGCACCTG TTGATGAATC TTGCGGGTCT GTGGGTTGTG
CTGTTTTTGC ATCATTTCCA CTACCATCTC AAAGGCTTAA GCGCGCTATT CCTTGTGCTA
TGTCTACTCG AAGGCATAGG CTTATATTTG GGCTACCCGC AATTGCTCGG TTATGTCGGC
TTAAGCGGTA TGTTGCATGG CTTATTCGCC TTCGGCGCGG TTCAGGATAT TGTCCGCAAG
CTGCGCTCAG GCTATCTGCT GTTACTTGGC GTTATCATCA AGGTTGGCCA CGAACAGCTT
TATGGCGCCA GCAATGATGT CACCGCCATG ATAGGCGCGC GCGTGGCAAC CGAGGCGCAT
TTGGTCGGTT TAATCTGTGG GCTGATTTGT GCTTTAGCGG TATTCATCAA GCTAAAGTTT
CGCCACGTAA AAGTCTCTGC GTAA
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| Protein sequence | MSLICAGLYV AGLASPAVDN LLAYRRSAIA DGEWWRLISG NLLHTNQWHL LMNLAGLWVV
LFLHHFHYHL KGLSALFLVL CLLEGIGLYL GYPQLLGYVG LSGMLHGLFA FGAVQDIVRK
LRSGYLLLLG VIIKVGHEQL YGASNDVTAM IGARVATEAH LVGLICGLIC ALAVFIKLKF
RHVKVSA
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