| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2201 |
|---|
| Symbol | |
|---|
| ID | 4843942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 2547126 |
|---|
| End bp | 2548562 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640119417 |
|---|
| Product | cbb3-type cytochrome c oxidase subunit I |
|---|
| Protein accession | YP_001050566 |
|---|
| Protein GI | 126174417 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
|---|
| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00427716 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAACC ATTCCCAGCC AACAGGCGCT GATTACAATT ACGCCATTGT CCGCCAATTT
GCCTTAACCA CAGTTTTGTG GGGTATTGTT GGTATGTCAG TCGGCGTATT AATTGCGGCT
CAGTTAATCT GGCCTCAGCT GAACTTTGAC ACTCCTTGGT TAACGTATAG TCGCTTGCGA
CCATTACACA CCAATGCGGT GATCTTCGCG TTCGGTACAT CAGCCCTTTT TGCAACATCC
TATTATGTCG TACAACGCAC CTGTCAAACC CGACTATTTG CACCTAAGTT AGCCGCATTT
ACGTTTTGGG GATGGCAAGC CATCATTCTG TCAGCAGCTA TCACTTTGCC AATGGGTTTC
ACCCAAGGTA AAGAATACGC TGAATTAGAA TGGCCTATCG ATATCGCAAT TACTATCGTT
TGGGTGTCCT ACGCTATTGT GTTCTTCGGT ACTATTATCA AACGAACGAC TTCGCATATT
TACGTGGCGA ACTGGTTCTT TGGTGCCTTT ATTATTACCG TTGCCGTACT ACACATAGTT
AACTCTATGG CAGTACCAGT CAGTCTGTTC AAGTCATACT CTCTGTATAG CGGCGCTGTC
GATGCTATGG TGCAGTGGTG GTATGGTCAC AACGCTGTAG GTTTCTTATT AACCGCAGGC
TTCTTGGGGA TGATGTATTA CTTCGTACCT AAGCAAGCGG GTCGTCCGGT GTACTCTTAC
CGTCTATCTA TTGTCCATTT TTGGGCTTTG ATCGCACTGT ATATTTGGGC TGGTCCTCAC
CACTTACATT ACACAGCTTT ACCTGACTGG ACTCAGTCTT TAGGTATGGT GATGTCACTG
ATCCTATTCG CACCTTCTTG GGGCGGTATG ATTAACGGTA TCATGACCTT GTCTGGTGCT
TGGCATAAAC TGCGTACTGA CCCTGTACTG CGTTTCTTAG TCGTTTCTCT GTCTTTCTAC
GGTATGTCTA CCTTCGAAGG CCCGATGATG GCAATTAAGA CAGTTAACGC ACTATCACAT
TATACAGACT GGACTATCGG TCACGTTCAC TCCGGCGCGC TAGGCTGGGT TGCAATGGTG
TCTATCGGTT CTCTGTATCA TTTGATCCCT GTATTGTTCG GCCACGGCCG TATGTACAGC
ATCAAGTTAG TCAACGTCCA TTTCTGGTTA GCGACTATTG GTACTGTGCT TTACATCGTC
TCTATGTGGA TTTCAGGTGT AATGCAAGGT CTAATGTGGC GCGCAGTGAA TGCTGACGGT
ACTTTGACTT ATAGCTTTGT TGAAAGTCTT GAAGCTTCAT ATCCTTTCTA CTTTGTACGT
TTCCTTGGCG GTTGTTTCTT CCTGACCGGT ATGCTGATCA TGGCATACAA CGTGATCCGT
ACTGTGAAAG CCTCTAAAGA TTCATTGCCA GCATTGGCTG AACCAACAGC GGCTTAA
|
|---|
| Protein sequence | MMNHSQPTGA DYNYAIVRQF ALTTVLWGIV GMSVGVLIAA QLIWPQLNFD TPWLTYSRLR
PLHTNAVIFA FGTSALFATS YYVVQRTCQT RLFAPKLAAF TFWGWQAIIL SAAITLPMGF
TQGKEYAELE WPIDIAITIV WVSYAIVFFG TIIKRTTSHI YVANWFFGAF IITVAVLHIV
NSMAVPVSLF KSYSLYSGAV DAMVQWWYGH NAVGFLLTAG FLGMMYYFVP KQAGRPVYSY
RLSIVHFWAL IALYIWAGPH HLHYTALPDW TQSLGMVMSL ILFAPSWGGM INGIMTLSGA
WHKLRTDPVL RFLVVSLSFY GMSTFEGPMM AIKTVNALSH YTDWTIGHVH SGALGWVAMV
SIGSLYHLIP VLFGHGRMYS IKLVNVHFWL ATIGTVLYIV SMWISGVMQG LMWRAVNADG
TLTYSFVESL EASYPFYFVR FLGGCFFLTG MLIMAYNVIR TVKASKDSLP ALAEPTAA
|
|---|
| |