Gene Sbal_2116 details

Gene Information

• Locus tag: Sbal_2116
• ID: 4842672
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 2456546
• End bp: 2457166
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640119332
• Product: chemoreceptor glutamine deamidase CheD
• Protein accession: YP_001050484
• Protein GI: 126174335
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTAAAAC CTAATATCGA ATATGCCGTA ACAGAGCCGA ATCGCTACCA TGATAGTCAT 
TTTGGTTGCG ATGCGGTGAA GATCTTACCC GGCGAATATT TTGCCACCCG TGAAAATACC 
ATGATAGTGA CTGTGCTTGG CTCCTGCGTG TCAGTGTGCT TGTATGATCC TAAGCTCAAA 
ATCGGCGGGA TGAATCACTT TCTATTACCA AGCGATAACA GTAATAGCAC TGGGGTGCTC 
GCCGACTCTG CCCGCTACGG TGTGTATGCA ATGGAACTGT TATTAAATGA CTTACTAAAA 
CTCGGTGCAC GTCGAAGCGC AATTGAGGCA AAGGTATTTG GTGGCGGCAA CATGTTGCAA 
GGTTTTACAC TGCATAACAT TGGTGAGCGT AATGCTGAGT TTGTAATTGA ATATCTTAAT 
ACGGAAAATA TCCCGATTAT TGCCGCCGAT TTACTCGATG TGTATCCGCG CAAAGTGTAT 
TTTTTCCCCC ATACGGGCAA AGTGAAAGTT CGCAAAATTA AAAGTTTGCA CAACAGCACG 
ATCCTTGACC GAGAAAGCGA GTATCGCTTA CGGGTTCGTA ATCTCCCCAC GGGCGGCGAC 
GTTGAACTAT TTGGTGATTA A 

 

Protein sequence

MLKPNIEYAV TEPNRYHDSH FGCDAVKILP GEYFATRENT MIVTVLGSCV SVCLYDPKLK 
IGGMNHFLLP SDNSNSTGVL ADSARYGVYA MELLLNDLLK LGARRSAIEA KVFGGGNMLQ 
GFTLHNIGER NAEFVIEYLN TENIPIIAAD LLDVYPRKVY FFPHTGKVKV RKIKSLHNST 
ILDRESEYRL RVRNLPTGGD VELFGD