| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2085 |
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| Symbol | emrD |
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| ID | 4845215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 2419077 |
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| End bp | 2420309 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640119303 |
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| Product | multidrug resistance protein D |
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| Protein accession | YP_001050455 |
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| Protein GI | 126174306 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.88065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGGCA CGCCACACTC TCCTATTCAT CACTATGTCG CTCCAGCGGC GAGTCAGTCT
AGTTTACTGT TAATGATTGT CTTTATGGTC GCCTGTGGCC AAATGGCGCA GACGATTTTT
GTGCCTGCCC TTCCGCAAAT TGCACTCGGG CTCCATGTGG ACGCCAGTCA GCTACAAGCA
GTGATGGCCT GTTACTTACT CTCCTACGGG ATCTTTCAAT TTGTGTATGG CCCAGTGTCA
GATCGCGTTG GTCGTAAATT GCCACTCGTC GTGGGTATCG CTATTTTCAT CATAGGAGCA
GTGTTTGCGG CTCAGGCCAC AAGCTTTAAC CAACTGATTA TGGCGAGCCT TATCCAAGGA
TTAGGCACAG CTAGCGCGGG CGCATTATGC CGGAGCATTC CCCGCGATCA TTACTTTGGC
GACCGACTGG TTAAATTTAA TAGTTATGTT TCTATGGCCG TAGTGTTTTT ACCTTTACTG
GCACCATTTA TCGGTAGCGC CAGTGCGGCC TACTTCGGCT GGCAAGCCGT GTACTGGGTG
TTAGCAGGAT TCGGTGCCGT GGTCTGGCTG TTATTGATAT TCGCCTTTAA AGAGTCATTA
CCTAAGGCGC AGCGGGAACA TCAAGCCGTT ATCGCATCCT ATCGGCATGT CCTGCGCCAT
AAAGCGTTTC GAGCTTACTT ATTTTCTTTG ATCGCGACCT TTGCGGGTAT TGCGGCGTTT
GAAGCTATTG CCGGCGTTCT CTATGGCCAA TATCTTGGAC TGACGCCCTT CATGGTCAGT
TGTTATTTTG TGGCGCCGAT TCCAGGCTAT TTATTGGGCG CGCTGATCGC AGGTCGACAA
AATAAGCCGC AAAGAGTTAT CTATCAAGGT GTTGCGCTGC TTGGCGCTGG CGCCTTATTC
ATGTTGATCC CGGGACTTTT CAATTTAGTC GTCGGTTGGA GTCTACTGGT TGGATCGATT
TTATTCTTCA GTGGCGCCGG CATGCTGTTC CCTACCCTGA CCTCGGCGGC ATTAGAGCCA
TTTCCACGTC AAGCAGGAAT TGCGGGGGCA TTACTGGGAG GATTACAAAA TTTTGGTGCC
GGACTTGCCG CATTGACTAT GTCTTTAGTG CCTATGGGCG GCCAGTTGAG CATAGGTTTA
TTAAGCGCTG TCATGGTGGT GTTAGTGATT TTGTCTTTGT ATTACGCCAG AGATCAAAAT
GACACTCACC ACAATTTGAT GCCACTGATT TAA
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| Protein sequence | MSGTPHSPIH HYVAPAASQS SLLLMIVFMV ACGQMAQTIF VPALPQIALG LHVDASQLQA
VMACYLLSYG IFQFVYGPVS DRVGRKLPLV VGIAIFIIGA VFAAQATSFN QLIMASLIQG
LGTASAGALC RSIPRDHYFG DRLVKFNSYV SMAVVFLPLL APFIGSASAA YFGWQAVYWV
LAGFGAVVWL LLIFAFKESL PKAQREHQAV IASYRHVLRH KAFRAYLFSL IATFAGIAAF
EAIAGVLYGQ YLGLTPFMVS CYFVAPIPGY LLGALIAGRQ NKPQRVIYQG VALLGAGALF
MLIPGLFNLV VGWSLLVGSI LFFSGAGMLF PTLTSAALEP FPRQAGIAGA LLGGLQNFGA
GLAALTMSLV PMGGQLSIGL LSAVMVVLVI LSLYYARDQN DTHHNLMPLI
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