Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_2038 |
Symbol | aspS |
ID | 4842087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 2362390 |
End bp | 2364168 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640119257 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_001050409 |
Protein GI | 126174260 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.323108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAGTC ATTATTGTGG AGACGTCAAT AAGTCTCACG TTGGACAAGA AGTTACCTTG GTAGGTTGGG TTAATCGTAG CCGTGATTTG GGTGGAGTTG TCTTTTTAGA TTTAAGAGAC AGAGAAGGTC TGATCCAAGT GGTCTATGAT CCAGACTTAC CTGAGGTGTT CAATGTCGCC AGCACGCTGC GCGCCGAATT TTGCGTTCAG GTTAAAGGCC TAGTTCGCGC CCGTCCTGAT AGCCAAGTCA ATGGTCAAAT GAAGACGGGT GAGATTGAAG TCTTAGGCCA AGCCTTGACT ATCATCAACG CTGCCGATCC ACTGCCATTG AGCATGGATA ACTACCAGAA CAACAGCGAA GAGCAACGTC TTAAGTATCG TTACTTAGAT TTACGTCGCC CAGAAATGGC GCAGCGATTA ATTTTCCGCG CTAAAGTGAC CAGTTCTGTG CGTCGTTTCC TCGACTCAAA CGGTTTCTTA GACATAGAAA CACCGATCCT GACCAAGGCA ACCCCAGAAG GTGCCCGCGA TTATTTAGTA CCAAGCCGGA CTTATAAAGG TCAGTTCTTT GCCTTGCCAC AATCGCCACA GCTGTTTAAA CAGTTGCTGA TGATGTCAGG CTTTGATCGT TACTATCAAA TCGTAAAATG CTTCCGTGAT GAAGATTTAC GTGCCGACCG CCAGCCAGAA TTCACCCAAA TCGATATCGA AACGTCTTTC ATGAGCTCTG AGCAAGTGAT GGCGAAAACC GAAGAGATGA TGCGCGGTCT GTTCCTTGAA ATGCTGAATG TGGATCTGGG CGAGTTCCCA CGCATGACCT ACAACGAAGC GATGCGTCGT TTCGGTTCAG ATAAGCCAGA TTTACGTAAC CCATTAGAGC TGGTGGACAT TGCCGATTTA CTCAAAGAAG TCGAATTTGC GGTATTCTCT GGTCCTGCTA ATGATGAAGA AGGCCGTGTT GCTGCACTGC GTATTCCAGG CGGCGCTGCA CTGTCTCGTA AGCAAATAGA TGATTATACG AAGTTTGTTG GCATCTATGG TGCTAAAGGC TTAGCGTGGA TGAAGATTAA TGACCTAAGC CTTGGCTTAG AAGGCATTCA ATCACCTGTG CTGAAATTCT TAAACGACAG CATAGTCAAT GAAATCGTCA GCCGCACTGG CGCGCAAACT GGCGATATTA TCCTGTTTGG TGCTGACCAA GCGACAGTGG TTGCCGAATC TATGGGCGCA CTGCGTCTTA AAGCCGGCGA AGATTTCAGC TTATTGCAAG GCGAATGGCG TCCACTGTGG GTGGTTGACT TCCCAATGTT TGAGAAAATC AACGGCAACT TCCATGCAGT TCACCATCCG TTCACCGCAC CGCGCGGCGT AACGGCGGCA GAACTTGAAG CTAACCCAGC TAATCGCGTT TCTGATGCTT ACGATATGGT ATTAAACGGC TGCGAATTAG GCGGTGGTTC AGTGCGTATC CACAACCAAG AAATGCAGTC TGCGGTATTC CGTATTTTGG GTATTACCGA CGAAGAAGCT AAAGAGAAGT TCGGCTTCCT GTTAGAAGCG CTGCGTTACG GTACTCCGCC ACATGCAGGT TTAGCATTTG GTTTAGACCG CATCATCATG CTGATGACGG GCGCAAGCTC AATCCGCGAT GTGATGGCGT TCCCGAAAAC GACTACTGCC GCTTGCCCGC TGACTAACGC ACCAGGATTT GCTAATCCAC AGCAGTTAGC TGAACTTGGC ATTGCCGTGG TTGAGAAAGC CGTTAAAACG GAAGACTGA
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Protein sequence | MRSHYCGDVN KSHVGQEVTL VGWVNRSRDL GGVVFLDLRD REGLIQVVYD PDLPEVFNVA STLRAEFCVQ VKGLVRARPD SQVNGQMKTG EIEVLGQALT IINAADPLPL SMDNYQNNSE EQRLKYRYLD LRRPEMAQRL IFRAKVTSSV RRFLDSNGFL DIETPILTKA TPEGARDYLV PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF MSSEQVMAKT EEMMRGLFLE MLNVDLGEFP RMTYNEAMRR FGSDKPDLRN PLELVDIADL LKEVEFAVFS GPANDEEGRV AALRIPGGAA LSRKQIDDYT KFVGIYGAKG LAWMKINDLS LGLEGIQSPV LKFLNDSIVN EIVSRTGAQT GDIILFGADQ ATVVAESMGA LRLKAGEDFS LLQGEWRPLW VVDFPMFEKI NGNFHAVHHP FTAPRGVTAA ELEANPANRV SDAYDMVLNG CELGGGSVRI HNQEMQSAVF RILGITDEEA KEKFGFLLEA LRYGTPPHAG LAFGLDRIIM LMTGASSIRD VMAFPKTTTA ACPLTNAPGF ANPQQLAELG IAVVEKAVKT ED
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