Gene Sbal_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_2038 
SymbolaspS 
ID4842087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp2362390 
End bp2364168 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content49% 
IMG OID640119257 
Productaspartyl-tRNA synthetase 
Protein accessionYP_001050409 
Protein GI126174260 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0173] Aspartyl-tRNA synthetase 
TIGRFAM ID[TIGR00459] aspartyl-tRNA synthetase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.323108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGTC ATTATTGTGG AGACGTCAAT AAGTCTCACG TTGGACAAGA AGTTACCTTG 
GTAGGTTGGG TTAATCGTAG CCGTGATTTG GGTGGAGTTG TCTTTTTAGA TTTAAGAGAC
AGAGAAGGTC TGATCCAAGT GGTCTATGAT CCAGACTTAC CTGAGGTGTT CAATGTCGCC
AGCACGCTGC GCGCCGAATT TTGCGTTCAG GTTAAAGGCC TAGTTCGCGC CCGTCCTGAT
AGCCAAGTCA ATGGTCAAAT GAAGACGGGT GAGATTGAAG TCTTAGGCCA AGCCTTGACT
ATCATCAACG CTGCCGATCC ACTGCCATTG AGCATGGATA ACTACCAGAA CAACAGCGAA
GAGCAACGTC TTAAGTATCG TTACTTAGAT TTACGTCGCC CAGAAATGGC GCAGCGATTA
ATTTTCCGCG CTAAAGTGAC CAGTTCTGTG CGTCGTTTCC TCGACTCAAA CGGTTTCTTA
GACATAGAAA CACCGATCCT GACCAAGGCA ACCCCAGAAG GTGCCCGCGA TTATTTAGTA
CCAAGCCGGA CTTATAAAGG TCAGTTCTTT GCCTTGCCAC AATCGCCACA GCTGTTTAAA
CAGTTGCTGA TGATGTCAGG CTTTGATCGT TACTATCAAA TCGTAAAATG CTTCCGTGAT
GAAGATTTAC GTGCCGACCG CCAGCCAGAA TTCACCCAAA TCGATATCGA AACGTCTTTC
ATGAGCTCTG AGCAAGTGAT GGCGAAAACC GAAGAGATGA TGCGCGGTCT GTTCCTTGAA
ATGCTGAATG TGGATCTGGG CGAGTTCCCA CGCATGACCT ACAACGAAGC GATGCGTCGT
TTCGGTTCAG ATAAGCCAGA TTTACGTAAC CCATTAGAGC TGGTGGACAT TGCCGATTTA
CTCAAAGAAG TCGAATTTGC GGTATTCTCT GGTCCTGCTA ATGATGAAGA AGGCCGTGTT
GCTGCACTGC GTATTCCAGG CGGCGCTGCA CTGTCTCGTA AGCAAATAGA TGATTATACG
AAGTTTGTTG GCATCTATGG TGCTAAAGGC TTAGCGTGGA TGAAGATTAA TGACCTAAGC
CTTGGCTTAG AAGGCATTCA ATCACCTGTG CTGAAATTCT TAAACGACAG CATAGTCAAT
GAAATCGTCA GCCGCACTGG CGCGCAAACT GGCGATATTA TCCTGTTTGG TGCTGACCAA
GCGACAGTGG TTGCCGAATC TATGGGCGCA CTGCGTCTTA AAGCCGGCGA AGATTTCAGC
TTATTGCAAG GCGAATGGCG TCCACTGTGG GTGGTTGACT TCCCAATGTT TGAGAAAATC
AACGGCAACT TCCATGCAGT TCACCATCCG TTCACCGCAC CGCGCGGCGT AACGGCGGCA
GAACTTGAAG CTAACCCAGC TAATCGCGTT TCTGATGCTT ACGATATGGT ATTAAACGGC
TGCGAATTAG GCGGTGGTTC AGTGCGTATC CACAACCAAG AAATGCAGTC TGCGGTATTC
CGTATTTTGG GTATTACCGA CGAAGAAGCT AAAGAGAAGT TCGGCTTCCT GTTAGAAGCG
CTGCGTTACG GTACTCCGCC ACATGCAGGT TTAGCATTTG GTTTAGACCG CATCATCATG
CTGATGACGG GCGCAAGCTC AATCCGCGAT GTGATGGCGT TCCCGAAAAC GACTACTGCC
GCTTGCCCGC TGACTAACGC ACCAGGATTT GCTAATCCAC AGCAGTTAGC TGAACTTGGC
ATTGCCGTGG TTGAGAAAGC CGTTAAAACG GAAGACTGA
 
Protein sequence
MRSHYCGDVN KSHVGQEVTL VGWVNRSRDL GGVVFLDLRD REGLIQVVYD PDLPEVFNVA 
STLRAEFCVQ VKGLVRARPD SQVNGQMKTG EIEVLGQALT IINAADPLPL SMDNYQNNSE
EQRLKYRYLD LRRPEMAQRL IFRAKVTSSV RRFLDSNGFL DIETPILTKA TPEGARDYLV
PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF
MSSEQVMAKT EEMMRGLFLE MLNVDLGEFP RMTYNEAMRR FGSDKPDLRN PLELVDIADL
LKEVEFAVFS GPANDEEGRV AALRIPGGAA LSRKQIDDYT KFVGIYGAKG LAWMKINDLS
LGLEGIQSPV LKFLNDSIVN EIVSRTGAQT GDIILFGADQ ATVVAESMGA LRLKAGEDFS
LLQGEWRPLW VVDFPMFEKI NGNFHAVHHP FTAPRGVTAA ELEANPANRV SDAYDMVLNG
CELGGGSVRI HNQEMQSAVF RILGITDEEA KEKFGFLLEA LRYGTPPHAG LAFGLDRIIM
LMTGASSIRD VMAFPKTTTA ACPLTNAPGF ANPQQLAELG IAVVEKAVKT ED