Gene Sbal_2027 details

Gene Information

• Locus tag: Sbal_2027
• Symbol: thiH
• ID: 4844265
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 2346834
• End bp: 2347949
• Gene Length: 1116 bp
• Protein Length: 371 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640119246
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_001050398
• Protein GI: 126174249
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTTG TCGCGGAATT TGCCAAGATC CCACGGGATA AACTGTTACT CGATTTGTAT 
TCTTGCACAG CCCAAGATGT CGAGCGGGCG TTAGTGAGTC CTGCAGGGGA TTTACGTAGC 
TTACTGGCCT TATTATCACC TGCGGCGGAA CCTTATATCG AAACCATGGC GCAGCACTCT 
GCTGCGCTTA CGCGGCAGCG ATTTGGCGCG AATCTGGGCA TGTATTTACC GCTATACGTC 
TCGAATCTGT GCGCTAATGA GTGTGATTAC TGTGGCTTTA GCATGAGTAA CAAACTCAAA 
CGCAAGACCT TGAATGAGCT GGAGTTGATG GCCGAAATGG CCATTATCAA AGATAGGGGC 
TTCGATTCTA TTTTACTGGT GTCGGGTGAG CATGAAACTA AGGTTGGTAT CGATTATTTC 
AAGCAAATGT TGCCGCTGGT AAAGCAGCAA TTTAGCCATT TGGCGATGGA GGTCCAGCCC 
ATGAGTGAGG ACCATTATTG CCAGTTAGTC GCGCTAGGTT TAGATGCCGT GATGATTTAT 
CAAGAGACCT ATCAGCCCGA GACTTATGCT CGTCACCATT CCCGAGGTAA AAAAATGGAT 
TTTGCTTATC GCTTAGCAAC ACCTGACAGA GTTGCGGCGG CGGGCGTTGA TAAAATTGGT 
CTTGGGGTAT TACTGGGGCT GGATGATTGG CGTTTAGATG CGTTAATGAT GGGATATCAT 
CTCGACTATT TAGAGCGACG CTATTGGCGT ACCCGCTTTA GTATTTCGCT ACCAAGGTTA 
AGGCCTTGTA CTGGCGGGAT CACCCCAAAA GTCATGCTAT CGGATCTAGG TTTAGTGCAA 
ATGATTTGTG CATTTAGACT TTTTAATCAA CAGCTTGACA TCAGCATGTC GACAAGGGAA 
AGCCCTGAGC TGAGGGATAA TCTTTTACCA CTTGGGATCA CTCAAATCAG TGCGGGCAGT 
TCGACACAAC CGGGCGGCTA TCAAGCGCCT GACAGTCAAC TCGATCAATT TGAGATAAGC 
GATGATCGCA GTGTCGAGCA AGTTATTGAA CAGATGCAAC GGCAGGGTTT TAATCCCGTA 
TTTAAGGATT GGGAAGCCAA TTGGATCACA GGATAA 

 

Protein sequence

MSFVAEFAKI PRDKLLLDLY SCTAQDVERA LVSPAGDLRS LLALLSPAAE PYIETMAQHS 
AALTRQRFGA NLGMYLPLYV SNLCANECDY CGFSMSNKLK RKTLNELELM AEMAIIKDRG 
FDSILLVSGE HETKVGIDYF KQMLPLVKQQ FSHLAMEVQP MSEDHYCQLV ALGLDAVMIY 
QETYQPETYA RHHSRGKKMD FAYRLATPDR VAAAGVDKIG LGVLLGLDDW RLDALMMGYH 
LDYLERRYWR TRFSISLPRL RPCTGGITPK VMLSDLGLVQ MICAFRLFNQ QLDISMSTRE 
SPELRDNLLP LGITQISAGS STQPGGYQAP DSQLDQFEIS DDRSVEQVIE QMQRQGFNPV 
FKDWEANWIT G