| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2023 |
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| Symbol | |
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| ID | 4844261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2342995 |
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| End bp | 2344947 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640119242 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_001050394 |
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| Protein GI | 126174245 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase
[TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGGTA TTCATGGGGA TAATGCGCCC ATGAATACCG AGCATCCCGC GTTTGTTTGG
ACCATAGCTG GTTCAGATAG TGGCGGTGGT GCCGGTATTC AGGCGGACTT AGCGACAATT
CAAGATTTGG GCTGTCACGG TTGCAGTGTG GTCACCACAG TGACGGCGCA AAGTTCTGTG
GCGGTCACTT TAGTCGAGCC CGTATCAGCG GCGATGTTAA TGGCTCAGCT GACGACTTTA
CTTTCCGACT TACCACCCAA AGCAATTAAA ATCGGCTTAC TGGCAGATCA AACTCAAGTG
GCATTGCTGG CAGATTGGAT CGCGAGTTTT AAAATCCACT ATCCATCTGT GCCTGTGATT
GTCGATCCTG TGATGGTCGC CAGTTGTGGC GATGCATTAG CAGTAGATAA CTGTCAGGAT
ATAAAAAGTG CGGCTAAATC AGCCTTAGAT TTTAAGCCTT TCAAAGGTTT AATCGAACTT
ATCACGCCCA ATGTGCTTGA ACTTGGGCGG TTAACTCACA GTGATGTTTC AACGAAAGCG
CAATTCGCTG CCGCGGCACT GGCCTTATCC CAGAGCCTTG ATTGCAGTGT GCTCGCCAAA
GGGGGCGATG TGAGCTTTGG CAGCACTGAC ATTCTTGATG ATACTCATGC TCAAACTCAC
GATAACACTT ATGCTCAAAC TCAGGCTAAC GTTCATGTTA TCGCTCTTGA TAGCAACGGC
TGGGACCTTG AGCTTGCCGA GGATTATCTA GTTTGTCGTC AAGTGCGCGC GAGCTCTAAA
CTACATCAAA ATGGGCGTTT CTGGTTAGCA AGCCAGCGGG TTAATACCCC TCATAACCAT
GGTAGCGGCT GTACTTTGTC ATCGGCCATT GCCGCCGTGT TAGCGCAGGG GTTTGTATTA
CAAGATGCGG TGGTGGTTGC CAAAGCCTAC GTGAGTCAAG GCTTAAGCGC GGCGATTGGT
TTAGGGCAAG GTCCAGGGCC GTTGGCCCGT ACGGGTTGGC CTAATGATGT GTCCCGCTAT
GCCAAGATAA ATCTGTGTGA TAGCAATTTT ATTAGTCATC AACTCAACCA ACACCTTGAT
GTTGGTAATG ATTTAGTTGC AACAGTTTTA TCCGCAACAG ATCAGGCAAC CGCTCAGGTA
AGAATAGCCT CGACGCAACC TCAAAATATT TTATCCCACG GTTTTAAAGT GCTCGATGCC
GATCTTGGTG TTTACCCCGT AGTGAATGAC TTAACCATGC TGGAGAGTTT GTTAGCTGCG
GGCGTTAAAA CCCTGCAGTT ACGGATAAAA ACCGACATCA GCGAGTTAAC TACTGCAGGG
TTAGCCGAAT CTGATTTAGG TAAATCTGCG CTAAGTAGAT GTGAGTCAGG CAAATCTAAG
TCAGGCGAAC CTGAGTTAAT TGGCTCCGAA TTAGAAGCAC AAATTCAAAC GGCCATTGCC
TTAGGTAAGC ATTTTAATGC GCAGCTTTTT ATCAATGATC ACTGGCAGTT AGCGATAAAA
TACCATGCCT TTGGGGTACA TTTAGGCCAA GAAGATCTCG CCGTTACCGA CTTAGCGGCC
ATTCAAGCCG CGGGGCTCGC GCTAGGCATA TCGAGCCACA GTTATTTCGA GCTGTTATTG
GCGCACCAAT ACTCGCCATC CTACATAGCG CTTGGGCATA TATTCCCAAC CACGACGAAG
CAAATGCCTT CGGCGCCCCA AGGGCTCGCA AAACTTAAAC ACTATGTGGC GTTACTCCAA
GACCATTATC CCTTGGTCGC CATTGGCGGT ATTGACTTAA CAAATCTGGC AAAGGTGAAA
GCAACGGGGG TGGGCAATAT TGCTGTGGTG CGCGCAATAA CGAAAGCTAA GGATCCGTTA
GCCGCCTTTG CAGAGTTGAG CCAAGCTTGG GAGCAATGTA GCTTGTCTGA AGAACTGGCT
GTAAAGCATG AGTTGGATGC AAAGCATGAG TAA
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| Protein sequence | MLGIHGDNAP MNTEHPAFVW TIAGSDSGGG AGIQADLATI QDLGCHGCSV VTTVTAQSSV
AVTLVEPVSA AMLMAQLTTL LSDLPPKAIK IGLLADQTQV ALLADWIASF KIHYPSVPVI
VDPVMVASCG DALAVDNCQD IKSAAKSALD FKPFKGLIEL ITPNVLELGR LTHSDVSTKA
QFAAAALALS QSLDCSVLAK GGDVSFGSTD ILDDTHAQTH DNTYAQTQAN VHVIALDSNG
WDLELAEDYL VCRQVRASSK LHQNGRFWLA SQRVNTPHNH GSGCTLSSAI AAVLAQGFVL
QDAVVVAKAY VSQGLSAAIG LGQGPGPLAR TGWPNDVSRY AKINLCDSNF ISHQLNQHLD
VGNDLVATVL SATDQATAQV RIASTQPQNI LSHGFKVLDA DLGVYPVVND LTMLESLLAA
GVKTLQLRIK TDISELTTAG LAESDLGKSA LSRCESGKSK SGEPELIGSE LEAQIQTAIA
LGKHFNAQLF INDHWQLAIK YHAFGVHLGQ EDLAVTDLAA IQAAGLALGI SSHSYFELLL
AHQYSPSYIA LGHIFPTTTK QMPSAPQGLA KLKHYVALLQ DHYPLVAIGG IDLTNLAKVK
ATGVGNIAVV RAITKAKDPL AAFAELSQAW EQCSLSEELA VKHELDAKHE
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