Gene Sbal_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_2013 
Symbol 
ID4845322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp2333742 
End bp2335469 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content45% 
IMG OID640119232 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001050384 
Protein GI126174235 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.899017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTGG CAAACATTGA TTGGATATCC ACAATGAAAA AGCCCCATGC ATTGAGCGTA 
TTCTATGCCA CATTGGCTGC CGCATTTTTA TTACTTTTGG CCATGTCTAT AACGTTCTAT
TTGTATATGG ACTCTAGGCT CGCAATTGAT AAGGCCCAGC TCAATCGCGA GCATTCTCTT
CACTTAGCTG ATGAGCTACG GCAAACATCT GATGATCTTA CTCGCATGGT TCGCTTATAC
GTGGTGACAG GTAACCCTAT GTATAAGAAA CAATTTCAGG AAGTGCTCGA CATTCGTGAT
GGTCTAGTGC CGCGTCCTGA AAATTACTCT TCTATATACT GGGATTTAGT TCTTGAGTCT
GATAAAAGGC CTCGCCCACT AAGTACTGCT GCAAAGTTAA CGGATTTAAT GCGTCAGGCC
GATGTCACCG AGCATGAATT CAGTTTACTT AACGCTGCCA AAGATAGCTC TGACGCTCTT
GTTAATTTGG AGCGCCAAGC AATGGTACTT CGCGAGCAAG CAACAAGTAA TGGACAAACA
CAAAGCTGGC AGGCCATTAC CATTATTCAC TCAAACGATT ATCAAAAAGC CAAAGCCGGC
ATTATGTTAC CTATTTTAAA TTTCACCGTA GCACTGGATG AACGCACGCA ACTTAACGTG
CAGTCTCATT TACAAACTGC AACTGCTCTA CAATATTGGC TCACCTTACT AGCCATTTTA
TCGGCACTCA CTATTGGTTT AGCGGCATGG GCATTACAAC GTATTCTCGG TGCATCTCTG
GGCACCATTG AAAAACATAT ATCGCACCTC GGTCATGGCG AGTATGTAGA TGCACTTAGC
GTTCATGGTG GGTTAGAAGC TAGCATTGCA GGCTGTATTG CACGCGCAGA AAAGCGCCTC
ACTGAAATTG AGATTGACCG TGAGCGACAG CAAGCGGAGC TAAAAAAAGC TGAGCATTCT
TTAATGGAGT CAGAACGACT CGCCTCTCTC GGAGCATTAG TTGCTGGGGT TGCCCACGAA
CTAAATACTC CTATCGGCAT TGCCGTAACG GCAGCCTCTG CGCTAGAAGC CAATACTAAA
GATATAGCGG CACAAATTAA AGACGGCAAG ATGCTCCGTT CAACATTCGA TAATTATATT
GAGCACTGTA GCCAAGGCAC ACCCATGATT TTACGCTCCT GCTTGCGTGC GGCCAACCTC
ATCGCCAGTT TTAAAAACAT ATCAGTAGAC CAAACATCCG AGCAGCGTCG TATCTTTAAG
CTACACGACG TCGCCAATGA TCATATCACT ATGTTACGTA CCGCCCATAA AAACGTAAAA
TGGACCTTCG AAAACACTAT CAGCCCTGAA ATTAGTTGCG ATGGTTACCC TGGGGCGCTT
GGGCAAGTAA TCTCAAATCT ACTACACAAT GCAGCAGTAC ATGCCTTCGA ACCAACCGAC
AGTGGCACAA TCACCATAAG CGCTGAAATA AAAGACGACT ACGTTACTAT TTATGTGACC
GATAACGGCA AGGGTATGAG CGAAGTTATT TTAGCGCGCA TATGGCAGCC TTTCTTCACC
ACTAAACTTG GCTCGGGTGG TTCGGGGCTA GGGCTTTCAA TTTGCCGAAA TATTGTAGTG
GGCATACTGG GTGGTTCCCT GATTGCCAGC TCCGCAGAAG GTCAAGGAAC CTGCTTCACC
TTACATCTGC CTTTAACCGC ATCAATAAAT CAGATTTATC ATAAGTAG
 
Protein sequence
MALANIDWIS TMKKPHALSV FYATLAAAFL LLLAMSITFY LYMDSRLAID KAQLNREHSL 
HLADELRQTS DDLTRMVRLY VVTGNPMYKK QFQEVLDIRD GLVPRPENYS SIYWDLVLES
DKRPRPLSTA AKLTDLMRQA DVTEHEFSLL NAAKDSSDAL VNLERQAMVL REQATSNGQT
QSWQAITIIH SNDYQKAKAG IMLPILNFTV ALDERTQLNV QSHLQTATAL QYWLTLLAIL
SALTIGLAAW ALQRILGASL GTIEKHISHL GHGEYVDALS VHGGLEASIA GCIARAEKRL
TEIEIDRERQ QAELKKAEHS LMESERLASL GALVAGVAHE LNTPIGIAVT AASALEANTK
DIAAQIKDGK MLRSTFDNYI EHCSQGTPMI LRSCLRAANL IASFKNISVD QTSEQRRIFK
LHDVANDHIT MLRTAHKNVK WTFENTISPE ISCDGYPGAL GQVISNLLHN AAVHAFEPTD
SGTITISAEI KDDYVTIYVT DNGKGMSEVI LARIWQPFFT TKLGSGGSGL GLSICRNIVV
GILGGSLIAS SAEGQGTCFT LHLPLTASIN QIYHK