Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_2003 |
Symbol | |
ID | 4843833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 2324890 |
End bp | 2325453 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640119223 |
Product | ISSod10, transposase OrfB |
Protein accession | YP_001050375 |
Protein GI | 126174226 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3335] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000219552 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACGA TCCTTAACAC ACCTGGGCAC ATTGCACTCG ATCGCATTGA CGTGTGGTTT CAAGATGAAG CCCGCTTTGG CCAACAGAAT ACCACCACCC GTATTTGGGC TGAGAAAGGG ACTCGTCCAC GAGCCGTCAA GCAGCAACAA TTTGAATCTG CGTATTTATA TGGCGCCGTG TGTCCGGCAA AGGGGGCGAC ACAAGCGATT ATTGCCCCGC ATGCCAATAG CGAATATATG CGCGAGCATT TAAAACTGAT TTCAACCGCC ACCGCATTTG GACGGCATGC GCTGGTCATC ATGGACGGCG CGGGCTGGCA TCAACAGGAT TTGGCCGATG ACTTTGATAA TCTGACGCTT CTCAAGTTGC CGCCTTATTC ACCGGAGTTA AATCCGATAG AGCAGGTATG GCAATGGCTG CGTCAACATG TGTTGGCTAA TCGTTGTTTT AGTGGTTACG ACGATATTGT CGAACAGTGC TCTATCGCAT GGAATACCCT CATTGAGAAG AAAACAAGAG TGATAGAATT GTGTACCAGA CAATGGGCAA TTTTGACCAG TTAG
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Protein sequence | MATILNTPGH IALDRIDVWF QDEARFGQQN TTTRIWAEKG TRPRAVKQQQ FESAYLYGAV CPAKGATQAI IAPHANSEYM REHLKLISTA TAFGRHALVI MDGAGWHQQD LADDFDNLTL LKLPPYSPEL NPIEQVWQWL RQHVLANRCF SGYDDIVEQC SIAWNTLIEK KTRVIELCTR QWAILTS
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