| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1996 |
|---|
| Symbol | |
|---|
| ID | 4845307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 2318328 |
|---|
| End bp | 2319119 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640119216 |
|---|
| Product | hydroxyacylglutathione hydrolase |
|---|
| Protein accession | YP_001050369 |
|---|
| Protein GI | 126174220 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0422138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACTA TAACAGCGAT CAAAGCCTTT AATGACAATT ATATCTGGGT GTTACAACAA
CAACCGCATA CACAGGTTTA TGTCGTCGAT CCCGGCGATG CGAGTGTGGT GATTGACTAT
TTAGAGGCCA ATCAACTCAC GCTAGCGGGC ATTTTACTGA CCCACCACCA CAATGACCAT
ACGGGTGGCG TCGCTGAACT TCAAGCCTAC AGTCAAAACC GACTCACAGT GTATGGCCCA
GATAATGAGA AGATTGAAGG CATCACCCAT CCGTTGAACG CAACAGCACA GCCCAGATTT
ATACTCGACT ATATGAGTGG CGAGCTGCAA GTCTTAGATG TACCGGGGCA CACAGCAGGA
CATATTGCCT ACGTTATTGC AGATGCCTTA TTCTGCGGTG ATACCCTCTT TAGCGCTGGC
TGCGGACGCT TATTTGAAGG TACGCCAGCG CAAATGCTCA ACTCACTACA GCAACTTGCC
CAGCTTCCCG CCGACACTCG GGTGTATTGT GCCCATGAGT ACACACTTTC AAACCTCAAA
TTTGCCCTCG CGGTCAATCC CAACAATCGC GCGCTGCAAG ACTATAACGA ACGCGCCGTA
GCGTTGCGTC GCCAAGACAA AGCGACTATC CCCTCCACCA TCGCCTTAGA ACGCGCCATC
AATCCCTTTC TACGTGCCAG CGACACTGAG ATTGTTGACA GCATAAAACA GCATTTTAGC
GATCTAAATC ATGCCAATTT AGACGAACTT GGCGGTTTTA CCCTGCTCAG ACAGTGGAAA
GATAATTTTT GA
|
|---|
| Protein sequence | MLTITAIKAF NDNYIWVLQQ QPHTQVYVVD PGDASVVIDY LEANQLTLAG ILLTHHHNDH
TGGVAELQAY SQNRLTVYGP DNEKIEGITH PLNATAQPRF ILDYMSGELQ VLDVPGHTAG
HIAYVIADAL FCGDTLFSAG CGRLFEGTPA QMLNSLQQLA QLPADTRVYC AHEYTLSNLK
FALAVNPNNR ALQDYNERAV ALRRQDKATI PSTIALERAI NPFLRASDTE IVDSIKQHFS
DLNHANLDEL GGFTLLRQWK DNF
|
|---|
| |