Gene Sbal_1981 details

Gene Information

• Locus tag: Sbal_1981
• ID: 4841864
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 2295346
• End bp: 2297334
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640119201
• Product: glucose-methanol-choline oxidoreductase
• Protein accession: YP_001050354
• Protein GI: 126174205
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG2303] Choline dehydrogenase and related flavoproteins

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCTC AAACCAATTA CGATGTCATT ATTGTGGGCT CTGGTATTGC GGGCTCTATC 
ATGGCTTATC AACTGGGGAT GGCGGGGAAA AAAGTATTAA TCCTCGAAGC AGGGCAGGAA 
GTGCCTGTTG ACCGCAGTGG TTACATGGAA ACCTTTTTTA AAGCCAATGC CAAAACACCT 
GAATCACCTT ATCCTCCTAC GACGCAAAAT CCAGCGGCAT CGACGGCGGA TAATCCACTC 
GGACTGCCTG ATCCTGCGAA GGAGAATGTG CCGCGTTATA CCGTGTTGCA AATTGGCGCA 
TGGCGTAATC CAAAGCAATG TTATTTCGAC TACACGCCGC AACCAGAGCA TTTGAAACCT 
GACAGTCCTG AAGCAAAGTT TGCTTTTGCC AGTTCCTATG AGCGCATTGG CGGCGGCACA 
ACTTGGCATT GGCTGGGAAC CAGTTTGCAT TTATTGCCCA ATGATTTTGA GTTGCAAACC 
CAGTATAAGC AGGGCGTGGA TTGGCCCGGT GGAAAACAAT TTTATCAGGC GCTGGTTCCT 
TACTATGAAC AGGCGACCAA TGAGATTGGC GTCGCCGGTG ACAAAGAGGC GATGGATCAG 
CTTTATCGCG GATTTAATGT TTCACCGGAT GGCGTTTATG GCGCGAATTA CGATTATCCC 
ATGCCTGGCA TTATTTCATC TTTAGTCGAT CAACAATACG AACAAGCGTT GAGCGATATG 
GTGTACGACA AGATTAAATT GTCAGTTACG CCAACCCCTC AGGGGCGTAA TTCATTACCG 
GGTGAACGCC GTCAATGTGC GGGTAATACG AATTGTATTC CTATTTGCCC AATCCAAGCC 
AAATACGATG CCACTGTGAC GCTCGGACGA GCATTGCAAA CCGGCAATGT TGATGTGTTT 
TATCGTCACG TTGCGACAAA TGTTCAAGTG GATGAAAATA CAAAAGATGT TGTTGGTATT 
GATTATGTGA CCTATCAAAC TCACGGAGGG GTAGCAACGG GCGGCGGTAC TTTTACGGCT 
AAAAAATATG TGATTGCCGC TCACGCGATT GAGACGCCAA AATTATTGCT CATGTCTAAG 
CGTAATAAAG CCTGTCCGAA CGGTGTTGCC AACCATAGCG ATCAAGTTGG GCGTAATTTG 
ATGGACCACA TCATGTATTT GGCCTGGGGT TTGGCGAAAG ATCCTGTCTA CGGTTTTCGA 
GGACCTCTAT CTACTGCGGG CATTGAAAGT TTACGCGATG GCGCCTTTCG TAAAGACCGT 
GCCGCCTATC GTATTGAAAT CGGCAATGAG GGTTGGCAGT GGGCCGCTAA TGATCCATTC 
ACTACCTTAG CCGACTTTAT ATTTGGTCAA AATAATTCGC AATTAAATGG GGATTCTGTC 
AATCAGCAGG GTATTCCATT GCGCTTTGAC CCTGCTATGC CTGCCAATAG CGCCTTATTT 
GGTGCCTCGT TGGTGAATAC CTTGAATAGT ATTTACACAC GGCAAATTCG TATGGGCTAT 
CTAATTGAGC AATTGCCGGA TCCGGAAAAC CGTGTAGAAC TGTCTGAGAC CTTGACTGAT 
AATTTAGGTT TACCGCGCCC AAAATTAACC TATCGAGTCC GCGAAGATTA TGTGCGCAAC 
GCATTTGTCT CGGCTAAAGA TATTTCGACC AAACTCTTTG ATGCCCTTGG TGCGCGGGAA 
TATACCAAGG CTCCGCCTGC GCCGGTTTTC TATGGTGATA AGCGTGAGGT GACGTCGAAT 
AATTTTGAAT ATCAAGGCAA TAATTTTACC TTTTACGGTG CTGGACATAT TGTGGGGACC 
TATCGAATGG GGGACTGCAA AGATACGTCG GTGGTGAATC CTCGCCAGCA ATCTTGGGAT 
CATAGCAATC TGTTTTTAGT CGGTAGCGGC GTGTTTCCAA CAGTTGCGAC GGGAAATCCC 
ACCCTCACTT TGGCAGCGTT GGCATTTCAG GCAGCAGATC ATGTATTAGC AGATCTCAAA 
GCATGTTAA 

 

Protein sequence

MSAQTNYDVI IVGSGIAGSI MAYQLGMAGK KVLILEAGQE VPVDRSGYME TFFKANAKTP 
ESPYPPTTQN PAASTADNPL GLPDPAKENV PRYTVLQIGA WRNPKQCYFD YTPQPEHLKP 
DSPEAKFAFA SSYERIGGGT TWHWLGTSLH LLPNDFELQT QYKQGVDWPG GKQFYQALVP 
YYEQATNEIG VAGDKEAMDQ LYRGFNVSPD GVYGANYDYP MPGIISSLVD QQYEQALSDM 
VYDKIKLSVT PTPQGRNSLP GERRQCAGNT NCIPICPIQA KYDATVTLGR ALQTGNVDVF 
YRHVATNVQV DENTKDVVGI DYVTYQTHGG VATGGGTFTA KKYVIAAHAI ETPKLLLMSK 
RNKACPNGVA NHSDQVGRNL MDHIMYLAWG LAKDPVYGFR GPLSTAGIES LRDGAFRKDR 
AAYRIEIGNE GWQWAANDPF TTLADFIFGQ NNSQLNGDSV NQQGIPLRFD PAMPANSALF 
GASLVNTLNS IYTRQIRMGY LIEQLPDPEN RVELSETLTD NLGLPRPKLT YRVREDYVRN 
AFVSAKDIST KLFDALGARE YTKAPPAPVF YGDKREVTSN NFEYQGNNFT FYGAGHIVGT 
YRMGDCKDTS VVNPRQQSWD HSNLFLVGSG VFPTVATGNP TLTLAALAFQ AADHVLADLK 
AC