| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1977 |
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| Symbol | |
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| ID | 4844287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2290379 |
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| End bp | 2291428 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640119197 |
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| Product | secretion system apparatus protein SsaU |
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| Protein accession | YP_001050350 |
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| Protein GI | 126174201 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4792] Type III secretory pathway, component EscU |
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| TIGRFAM ID | [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGA AAACAGAAAA ACCCACAGAA AAACGCTTAC GAGAAGCGAG AAATCGCGGC
CAGGTCATTA AAAGTGCAGA AATCGTCACC GGACTACAGA TGGCGATCAT TCTCGGGTAC
TTTCTCTACG AAGGGCCCGC ACTCGTTCAA GCCATGATGG CGTTAATCGA CTTAACCATT
AATGCCATCA ATCTTCCCCT CGAAACAGCG GCCGAACAAA TCGTGGGTAC CTTCGCCATG
CTGGCATTAC GTTTTCTCGG TGGGCTGACA TTAGTACTCG TGTTTACCAT AGTGGTGGGG
AACTCAGTCC AAACAGGCCC CGTTTGGGCG ACTGAGTCTA TAATGCCGAG CATGAATAAA
CTCAATGTTA TGAATAATGC TAAGCAACTT ATTTCACTGA AAAGTCTATT CGAGCTCGCT
AAAAACCTCG TCAAAGTCAC AGTGTTGAGT TTAGTGTTTT ACTATCTGCT CCATCGTTAC
GTTAATGCCT TTCAATACTT GCCTCTATGC GAAGAAGCCT GCGGCATCAG TGTGATTTCG
ACCATGATCA CATGGCTCTG GGGAAGCTTT TTAGGATGCT ACTTAATATT TGGGATCGCC
GATTATGCAT TTCAACGCTA TAGCCTAATG AAAGAGCTCA AAATGTCCAA AGATGACACC
AAACAAGAGT ACAAAGATTC TGAAGGTAAC CCCGAAATGA AACAGAAACG CCGCGAAACA
CAGCGTGAAG TCGCGTCTGG CAGCCTTGCC AATAACGTTC GCAAAGCCAC TGTGGTTGTA
CGAAATCCAA CCCATATTGC CGTGTGTTTG TATTATTGCG AAGGCGAGAC ACCGTTGCCT
AAAGTGCTCG AAAAAGCCGA AGATCACATG GCCTTACACA TAGTGGCTTT AGCCGAGAAA
GCAGGGGTGC CAATAGTTGA GAACATTCCA TTGGCACGCG CCTTATTTAA ACATGTTGAG
ACTGGAGACG TGATTCCAGA GAGCCTATTT GAACCCGTAG CAGAGCTATT GCGTTTAGTG
ATGGCTATAT CCTATGACAA TATGAAGTAA
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| Protein sequence | MAEKTEKPTE KRLREARNRG QVIKSAEIVT GLQMAIILGY FLYEGPALVQ AMMALIDLTI
NAINLPLETA AEQIVGTFAM LALRFLGGLT LVLVFTIVVG NSVQTGPVWA TESIMPSMNK
LNVMNNAKQL ISLKSLFELA KNLVKVTVLS LVFYYLLHRY VNAFQYLPLC EEACGISVIS
TMITWLWGSF LGCYLIFGIA DYAFQRYSLM KELKMSKDDT KQEYKDSEGN PEMKQKRRET
QREVASGSLA NNVRKATVVV RNPTHIAVCL YYCEGETPLP KVLEKAEDHM ALHIVALAEK
AGVPIVENIP LARALFKHVE TGDVIPESLF EPVAELLRLV MAISYDNMK
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