| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1976 |
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| Symbol | |
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| ID | 4844286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2289557 |
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| End bp | 2290357 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640119196 |
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| Product | type III secretion protein SpaR/YscT/HrcT |
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| Protein accession | YP_001050349 |
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| Protein GI | 126174200 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACTC TGCTGCCCAA TCTGTTAACG GCACAACTTC CTGTATTGGC ACTCTGTATG
ATGCGACCAT TAGGCATGAT GCTGTTATTG CCCCTATTCA AAGGCGGGGC TATGGGTAGC
GCATTAATCC GTAATAGCCT GATTTTAATG TTTGCTTTAC CTACTGTGCT GGCAATGGAT
GAAATGCAGC CGATACTGCA ACAGGCCGAC ACTTGGATGC TCATCAGCCT ATTTGGCAAA
GAAATGATTG TAGGCGTGTT ACTTGGTTTT TGCGCCGCTA TTCCCTTTTG GGCAATAGAT
ATGGCGGGAT TTGTGATTGA CACCATGCGG GGAGCATCCA TGTCGACTGT GCTTAATCCC
TTGATGGGAC TGCAATCATC GATTTATGGC ATGCTGTTTA CTCAAGTTCT GACAGTGCTG
TTTTTAGTCT CGGGTGGTTT TAATTTTCTG TTAACCGCAC TCTATCAATC CTATCAACAA
CTTCCCCCAG GATTTAATTT AACGCTAGCC CAACCCTTGA TGGTGTTTAT AGCCCATGAG
TGGCAATTGA TGTGCCAACT TTGCCTCAGT TTTGCCATGC CCGCCATGGT GATTATGATC
TTAGTCGATG TCGCCTTAGG GCTAGTAAAC CGCTCGGCGC AGCAGTTAAA TGTGTTCTTT
TTGTCTATGC CCATTAAAAG CGCTTTGGTC TTACTGTTAT TAATCTACAG CCTACAGTTT
GCCTTGTCCC ATTACCTGCA GACCATTTCT GGGGTAGAGC AGCACGTAGA TATTTTGTTT
GGACTCTTAG CAGGGCACTA G
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| Protein sequence | MTTLLPNLLT AQLPVLALCM MRPLGMMLLL PLFKGGAMGS ALIRNSLILM FALPTVLAMD
EMQPILQQAD TWMLISLFGK EMIVGVLLGF CAAIPFWAID MAGFVIDTMR GASMSTVLNP
LMGLQSSIYG MLFTQVLTVL FLVSGGFNFL LTALYQSYQQ LPPGFNLTLA QPLMVFIAHE
WQLMCQLCLS FAMPAMVIMI LVDVALGLVN RSAQQLNVFF LSMPIKSALV LLLLIYSLQF
ALSHYLQTIS GVEQHVDILF GLLAGH
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