| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1969 |
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| Symbol | |
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| ID | 4844279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2283337 |
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| End bp | 2285394 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640119189 |
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| Product | secretion system apparatus protein SsaV |
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| Protein accession | YP_001050342 |
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| Protein GI | 126174193 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4789] Type III secretory pathway, component EscV |
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| TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTCA TCAGTCGTTG GTTAAGTAAA GCCGCAGGGC GTCACGATAT CATCTTAAGT
GCCATGTTAA TGGTAGCCGT ATTTATGATG ATCTTGCCTC TACCGACACC TTTAGTCGAT
GTTTTAATTG CCTTAAACCT CGGCTTGTCC ATAGTGTTAT TGATGATCGC CATTTACATC
CGTGACCCTT TAGAGTTCTC AGTCTTTCCA TCCCTACTAC TGATCACAAC CTTGTACCGT
CTGGCACTCA CTATCAGCAC CAGTCGTTTG ATTTTACTGC AGCATGATGC AGGGGATATC
GTATATACCT TCGGTAACTT CGTCGTCGGC GGCAATTTAG CGGTCGGAAT TATTATCTTT
GCTATCATCA CCATAGTGCA GTTTATCGTG ATTACTAAGG GTTCCGAGCG GGTGGCGGAG
GTGAGTGCAC GTTTTTCTCT CGATGGAATG CCAGGTAAGC AAATGAGTAT TGATGGTGAC
ATGCGTGCTG GCATCATTGA CGCTAAAGAG GCAAAACGCC AACGTGCGCA AGTTCAGAAA
GAAAGTCAGC TCTATGGCGC CATGGACGGC GCGATGAAGT TTGTCAAAGG CGATGCCATC
GCCAGCATTA TTGTCATTTT AACCAATATC ATTGGTGGTA TCGCTGTCGG TGTCATGCAG
CACAATATGT CGGCTGCCGA AGCATTAAAT ACCTATGCAG TCTTATCTGT CGGGGATGGT
TTGATAGCCC AAATACCTTC GCTACTGATT TCAGTCACCG CAGGCTTAAT CGTGACCCGA
GTGCCAGGAG AGCAGAGACA GAACTTAGCC AACGAATTAG TGATGCAAGT AGGACGTCAA
CCTGCATCAT TGCAAATGGC GGGGATCGTG ATGTTCATCT TTGCCTTAAT CCCAGGTTTC
CCAATTTTAG TCTTCGGCAC ACTCGGTTCG GCCGTCTTAG GGGCTTCATG GTGGTTGACG
CGTCAGCAAA AACGAGCGAG TGCTCAAGGG GATGAGAGCC ATTTCACCGA AGCAGGTAAA
AGTGAGATGA CCAATGTCGA CAATATGGCG CCGGGAGCTG TACCGCTGAT TTTATATCTT
GGTGCCGATG TGCCTATCAA TGGGGTTAAA GAAGCACTGC AAAAACTGCG TTGGCAATGG
TTTGAGCAAT TGGGCGTGCC ATTACCGGAA ATACAATTAC AGATAGCTAA GAAAGGCACC
CTAGGCCGCT GTGATGTACT TTTGTACCAA GAGCCCGTAT TGCAACTGCA ATTAGCACCA
CAGGAAGTCC TGTTGATTGA CCCCATCGCA ACGATTCCAT GCCGTGTCGA GTCCATCCCT
TTTAGTAATC AAAGATTGCA TTGGATCAAA GGTAATGCGC TTGAGCAGGC GGAGGCCCAA
GGTTTAGCGG TTTGCCGTGA TGAGCAAATT CCTGCTTATG TGATGGGTAA AGTGATCGAC
CGCTATGCGG GGGAGTTTAT CGGCGTACAA GAAACCCGTT ATTTAATGGA TGCCATGGAG
GCTCGCTACG GTGAGCTAGT CAAAGAACTT CAACGACTGT TGTCTGTGGG GAAGGTCGCC
GAGATCCTAC AACGCTTAGT CGAAGAGGGG ATTTCAGTGC GCGATCTACG GACTATTTTT
GAAACCTTAG TCGAATGGGT ACCAAAGGAG AAAGACATCA TCATGTTAAC TGAGTATGTG
CGGATTGCGC TTCGCCGCCA TATTCGCCGC AAGTTTGCGA CCCCACAAGG TTGGATTGCT
GTGCTTATGG TCGGAGAAGG AATTGAAAAT GTGATCCGTG AATCGATACG ACAATCGACA
GCCGGCTCTT ATTCAGCCTT AGATATGGCG CAAACTCAGC AAATATTAAC CTGCATTCAA
GAACAGCTGC CACCGGAGCA AACCTGTGTA CTGCTGACTT CGCTCGATGT GCGCCGTTAC
CTGCGAAAAA TCGTAGAACG CGAGTTATTT AGCACACCCG TTTTGTCGTT TCAGGAATTA
GGCGACGATG CAGAAATAAA AGTCATAGGC CAAGTGGACT TAGTGGGTGA CATGCTCGAT
GCCGCACTGG CGAGCTAA
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| Protein sequence | MNLISRWLSK AAGRHDIILS AMLMVAVFMM ILPLPTPLVD VLIALNLGLS IVLLMIAIYI
RDPLEFSVFP SLLLITTLYR LALTISTSRL ILLQHDAGDI VYTFGNFVVG GNLAVGIIIF
AIITIVQFIV ITKGSERVAE VSARFSLDGM PGKQMSIDGD MRAGIIDAKE AKRQRAQVQK
ESQLYGAMDG AMKFVKGDAI ASIIVILTNI IGGIAVGVMQ HNMSAAEALN TYAVLSVGDG
LIAQIPSLLI SVTAGLIVTR VPGEQRQNLA NELVMQVGRQ PASLQMAGIV MFIFALIPGF
PILVFGTLGS AVLGASWWLT RQQKRASAQG DESHFTEAGK SEMTNVDNMA PGAVPLILYL
GADVPINGVK EALQKLRWQW FEQLGVPLPE IQLQIAKKGT LGRCDVLLYQ EPVLQLQLAP
QEVLLIDPIA TIPCRVESIP FSNQRLHWIK GNALEQAEAQ GLAVCRDEQI PAYVMGKVID
RYAGEFIGVQ ETRYLMDAME ARYGELVKEL QRLLSVGKVA EILQRLVEEG ISVRDLRTIF
ETLVEWVPKE KDIIMLTEYV RIALRRHIRR KFATPQGWIA VLMVGEGIEN VIRESIRQST
AGSYSALDMA QTQQILTCIQ EQLPPEQTCV LLTSLDVRRY LRKIVERELF STPVLSFQEL
GDDAEIKVIG QVDLVGDMLD AALAS
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