Gene Sbal_1958 details

Gene Information

• Locus tag: Sbal_1958
• ID: 4842246
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 2273386
• End bp: 2274084
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640119178
• Product: helix-turn-helix domain-containing protein
• Protein accession: YP_001050331
• Protein GI: 126174182
• COG category: [K] Transcription
• COG ID: [COG2207] AraC-type DNA-binding domain-containing proteins

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGCAA TACAAATAAT TTTGTTTCGA CAGCCAGGGA AAATCCACTG TCAGGGTGAA 
AACTTAGCGA TAGACAGCAA TCAGTTAGTC GTTACCACTG AGGAGGCTAC AGCCTCGGCC 
ATGAGTCGTG ACAGTTGGTT GAGCATCTTT TGTTATCCAG GGGAGTTACA CGCCTTATAT 
CACGAAATTG CCGATCTGAT TGGCCCGAGC ACTGAGATGA ATCGATTTCA ACTTGAATCA 
GTAAAAATAC TCCCCGTATT TGATGAGCTA AGCAATGTCA TTGAACAGTT GAAAGGTAAT 
CATAATTTAT TGATTAAGTT TATTTTTATG TACTGCCTGG GTATGGATAA CGGTTACTTT 
TCCGGCTTAA TGCGTTACTT CTTAGCCCAT AACGACAAGA TGCTGAGCTA TCTCGAGGGC 
AATTTTATGC AACCTTGGCC AGTCACACGC TTTGCCGAAG ATTTAGGCAT TGAAGTACGC 
CGACTCAATT TCTTGTTTTA TAAAAACTAT GGTGTATCGG CAAAGCAATG GTTGTTAGAA 
CGGCGCTTAA GTTATGCCCG TCAACAACTG ATGGTGACCG AGAAGAAAGT CGCCGACATT 
GCCTTAGATA GTGGTTTTAG CAATCACGCA CATTTTACCG AATCGTTTAA GAAACGTTAT 
TTATGCAGCC CAACCGTACT GCGTGCAAAC TTCGCATAA 

 

Protein sequence

MSAIQIILFR QPGKIHCQGE NLAIDSNQLV VTTEEATASA MSRDSWLSIF CYPGELHALY 
HEIADLIGPS TEMNRFQLES VKILPVFDEL SNVIEQLKGN HNLLIKFIFM YCLGMDNGYF 
SGLMRYFLAH NDKMLSYLEG NFMQPWPVTR FAEDLGIEVR RLNFLFYKNY GVSAKQWLLE 
RRLSYARQQL MVTEKKVADI ALDSGFSNHA HFTESFKKRY LCSPTVLRAN FA