| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1952 |
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| Symbol | |
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| ID | 4842240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2267090 |
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| End bp | 2268544 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640119172 |
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| Product | secretion system effector |
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| Protein accession | YP_001050325 |
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| Protein GI | 126174176 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5613] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.993071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATTA ACAGTGTATT GGAAAGAAGT CCTGAGAATG TGTCGGCCAA TTATGTTACC
GCTCAGGCGC ATGCTGTTAG CAAAGCAAGT TTGCCCGACT GGTCCATGCC TGTGCAGCTC
ACTCAAACTG AGCATACAGA TCAGCATCAA GGTCCAGTCA CAATGAAAGA TGCGCAAAGG
GCATTGCAGC GTATTTTAAC GCCCTTTTTT ACCCCAGACC CTAAAACGGG CGCTGTTGGT
GGATTGGGAT CATTAAATTC ATTAGAAAAA GCGTCCATGG ATTCCATGGT CATGATGGCT
GCGAATCTCA GCATTTCGAC CTTCGCAGAC ACAGCAAGCT CGGCCATGAA AGCCAGCAAG
ATAATGACAG ATACCCAAGA GTTCCTGCGC GATAAAAAAG TGAAGGAGTA TCAAGAGCAA
CTGGCGAAAG CCATCGAGCA AGCTGACAAG GCCCACAAGG GGGGGATTTT CGGTGCCATC
TTCGATTGGA TTGTCGGTGC AGTCGAAGCT ATTTACGGTG CCATCAAGTT GGTCGAGGGA
GCCTTACGCT GCGCGGTTGG CGATGTAGCG GGGGGCGCAT TAGAAATCGC CGGTGGTGCA
GCCTATCTCG CCGCAGGGGT CGCAGGCATG GTTAAAGCCG CGGCTGAAAC CGCCATCTTA
TGCGGGGCTG ACAAAGAGAA ATGCCAGAGC GTAATTGATG TGGCGGGCAA AGTGCAACTA
AGTTGCGAAA TTGTGGGCAT GGCACTGGAT ATCTTCCAAG CGGGGCGGGC AATTTCAGCG
ACACGTTCTA TTGCTAAAGG CACAGAAACT GCGATGAAAG AAGCGGCTCC TAAACTCGTT
GATGGCATTA CTAAAGGTTC TTCCGAGGCG ATCACTAATG TCGCGAAAGA AGTGGGTAAG
CAAGTTGCCG AACAAGTTAC TGATCAAGTA ATGGCTAACT TAGGAAAAGG CTTAAAAGAA
GCGGCTGAAC AGGGGGGGCG TAAACTTGCC AGCGGTCTGA TGGATGCCTT CAGTAAAGAG
GCGATTGAGC AACTCGTGAC TCGCTCTGTC GAAGAAGTTG GCAAACAAGC CATTAAGAAA
GGCGTGCTTG TCACCGCTGA GGAAATCACT AAGCAAGTGG TGAAAGAGGT GAGCCATGAA
GTGATTAAAA CGGCAATCAA AGCATGTACT TTTACAACCC TAGATGTGAT CCGTGCGACC
GCAGGTGCAG GAAAAGCCAT TACCGATGGC AGCATCGCCG TTGAGAAAGC CAAACTGCAA
AGGCAAATTG AAGAACTGAT TTTAAAACAG AATTTCTTAG AGTTTTGCTA CGAGTGGTAC
GACAAAGCTA AAGAGCAGCA AATGAAAACG GTAAAAGATC TGATTGAAAA ACAAGGCGAC
AGCTTAGACG GTGCCAGTAA GGCCATCAGT CAGAGTGGCG CACTACAAGC CCGTATCGCA
GGTTCAACAG TATAA
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| Protein sequence | MSINSVLERS PENVSANYVT AQAHAVSKAS LPDWSMPVQL TQTEHTDQHQ GPVTMKDAQR
ALQRILTPFF TPDPKTGAVG GLGSLNSLEK ASMDSMVMMA ANLSISTFAD TASSAMKASK
IMTDTQEFLR DKKVKEYQEQ LAKAIEQADK AHKGGIFGAI FDWIVGAVEA IYGAIKLVEG
ALRCAVGDVA GGALEIAGGA AYLAAGVAGM VKAAAETAIL CGADKEKCQS VIDVAGKVQL
SCEIVGMALD IFQAGRAISA TRSIAKGTET AMKEAAPKLV DGITKGSSEA ITNVAKEVGK
QVAEQVTDQV MANLGKGLKE AAEQGGRKLA SGLMDAFSKE AIEQLVTRSV EEVGKQAIKK
GVLVTAEEIT KQVVKEVSHE VIKTAIKACT FTTLDVIRAT AGAGKAITDG SIAVEKAKLQ
RQIEELILKQ NFLEFCYEWY DKAKEQQMKT VKDLIEKQGD SLDGASKAIS QSGALQARIA
GSTV
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