Gene Sbal_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_1942 
Symbol 
ID4844120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp2256454 
End bp2257518 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content45% 
IMG OID640119162 
Productintegrase catalytic subunit 
Protein accessionYP_001050315 
Protein GI126174166 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAGGAA AAAGAGGAAG ACTGATTTCG CTGACCGATA GGCAGAAGCA TGCGCAGTGG 
ATCTGCACAG CAGTAGCATC AGGCGCAAGA CAAGATAAGG CCTGTGACGT GATTGGATTA
TCAAGTAGAA CCTTGCAGCG TTGGCGAATA GACGGTGACA TTAGCGCAGA TAAAAGGCCA
ACGGCAACGA GGCCGGAGCC TGGAAATAAA CTGAGTCAAG CAGAAAGACA AGCCGTGATT
GATGTGTGTA ATAGTGAAGA GTTTGCCTCA TTACCACCAA GCCAAATTGT CCCGATACTC
GCCGATAGAG GTGAGTATAT TGCTTCGGAG TCGAGTTTTT ACCGTGTATT GCATACTGAA
AACATGCTGC ACCACCGAGG CAAAGCTAAG CCGAGAAATG TTCATAAAAA GCCAACCAGT
TATACGGCTA AAAAAGCGAA CGAAGTGTGG AGTTGGGATA TCAGTTACCT GCCTACAACG
GTGATAGGAA AACACTATTA TCTGTACATG ATTGAAGATA TTTACAGTCG AAAAATCGTT
GGTTGGGAAG TTCACGACAG TGAAACCGGC GAGCAAGCAG CAGCACTACT AGAGCGCACC
GTCTGGTCAG AGAAATGCTT AAAGAAAGAC GTTGTGTTGC ACTCAGATAA TGGCGCGCCC
ATGAAGAGCC TGACGATGCG AGCTAAGATG TACGATTTAG GCGTTGTGAC CTCACGAAGC
CGTCCAAGGG TAAGTAATGA TAATCCGTAC TCAGAATCAC TATTTAGAAC GGTAAAGTAT
CATCCACGTT GGCCTAGTGA AGGTTTTAAG TCATTAGAAG CAGCACGTAA ATGGGTCAAT
GAATTTGTTT ATTGGTACAA CAACGAGCAT CGCCATAGCA GGATTAAGTT TGTGACACCA
AACCAAAGGC ATGATGGTCT TGATGTTGGA ATACTGGCGA AGCGAAAAGC GTTGTATCAG
ACAAAAAGAA ATGAACATCC AAAGCGATGG TCAAAAGAAG AGCGAAACTG GCAGCCAATA
GGCGCTGTGG AGTTAAATCC AGAGCAACAT AAAGAAGCTG CTTAA
 
Protein sequence
MEGKRGRLIS LTDRQKHAQW ICTAVASGAR QDKACDVIGL SSRTLQRWRI DGDISADKRP 
TATRPEPGNK LSQAERQAVI DVCNSEEFAS LPPSQIVPIL ADRGEYIASE SSFYRVLHTE
NMLHHRGKAK PRNVHKKPTS YTAKKANEVW SWDISYLPTT VIGKHYYLYM IEDIYSRKIV
GWEVHDSETG EQAAALLERT VWSEKCLKKD VVLHSDNGAP MKSLTMRAKM YDLGVVTSRS
RPRVSNDNPY SESLFRTVKY HPRWPSEGFK SLEAARKWVN EFVYWYNNEH RHSRIKFVTP
NQRHDGLDVG ILAKRKALYQ TKRNEHPKRW SKEERNWQPI GAVELNPEQH KEAA