| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1918 |
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| Symbol | |
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| ID | 4842633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2228020 |
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| End bp | 2229564 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640119139 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
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| Protein accession | YP_001050293 |
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| Protein GI | 126174144 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000105288 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCTA ACCATGAAAT GTCTGTCAAT TCTGTGATTA AGCAAGCCGA CTTTATTGAA
AGTGTGGCGG ATGCTTTGCA ATACATCTCT TATTACCACC CGAAGGATTT TGTTGATGCC
ATGAGCCAAG CTTATGAGCG TGAACAAAGT GCTGCGGCGA AGGATGCCAT TGCCCAGATA
TTAATTAACT CGCGTATGTC GGCCGAAGGC AAGCGTCCTC TGTGTCAAGA CACTGGGATT
GTCACCACCT TCGTTAAAGT GGGTATGGGT GTCCAATGGG ACAAAACCGA TATGACAATT
CAGGAAATGG TCGACGAAGG TGTTCGTCGT GCTTATACCA ATCCTGATAA CCCACTGCGT
GCATCAATAG TGTCAGATCC TGCGGGCAGC CGTAAAAATA CCAAAGATAA CACGCCATCT
GTGGTGCATA TCGACATGGT GCCAGGCAAC CACATCGAAG TAGCGATTGC GGCCAAAGGC
GGCGGCAGTG AAAACAAAGC TAAGATGGTG ATGTTAAACC CATCTGATGA TATCGCCGCT
TGGGTAGAAA AAACGCTACC GACCATGGGC GCGGGCTGGT GTCCACCGGG TATGCTGGGT
ATAGGCATCG GCGGCACGGC AGAAAAAGCG GCCGTATTAG CCAAAGAAGC GCTGATGGAA
AGCGTGGATA TCCATGAGTT GATGGCCCGT GGCGCGCAAA CGACCGAAGA AAAGCTGCGT
TTAGACATTT TTGAGCGCGC GAATAGCTTA GGCATAGGTG CACAAGGTCT TGGCGGTTTA
ACCACAGTGT TAGACGTTAA AATCAAATCG GCACCAACCC ACGCAGCTTC AAAGCCTGTG
GTGATGATCC CCAACTGTGC AGCGACTCGC CACGTACATT TCCATTTAGA CGGCTCAGGT
CCAGCTGAAT TGACGCCACC ATCATTGTCA GATTGGCCAG AAATCACCCG TGAAGTGGGT
GATGATGTGC GCCGTGTTAA CTTAGATACT GTGACTCAAG CGGATATCGA GCAGTGGCAG
AGCGGTGAAA CCATTCTGCT GAGCGGTAAA ATGCTCACAG GTCGCGATGC TGCCCATAAG
CGCATTCAAA GCCTAATCGA AAGTGGTGAA GGTCTGCCAG AAGGCGTGGA CTTTACTGGT
AAATTTATTT ACTACGTTGG CCCCGTTGAT CCAGTGGGCA CTGAAGTTGT CGGTCCTGCG
GGCCCAACCA CAGCAACCCG TATGGATAAA TTCACTGACT TAATGTTAGA GAAAACTGGC
TTGATGGGCA TGATAGGTAA AGCTGAGCGC GGCCCTGCGA CAGTTGAATC AATCAAAAAA
CACAAAGCGG TATATCTGAT GGCCGTTGGC GGCGCAGCGT ATCTGGTGTC TAAAGCGATT
AAACATTCTC GCGTCGTGGC CTTTGCCGAT TTAGGCATGG AAGCGATTTA TGAGTTTGAC
GTGCAAGATA TGCCAGTGAC TGTGGCTGTG GATTCAAACG GCGTGAACGC CCATGAAACT
GGCCCAGCAA TTTGGAAAGT GAATATCGCC AACGCGAAAG CCTAA
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| Protein sequence | MSSNHEMSVN SVIKQADFIE SVADALQYIS YYHPKDFVDA MSQAYEREQS AAAKDAIAQI
LINSRMSAEG KRPLCQDTGI VTTFVKVGMG VQWDKTDMTI QEMVDEGVRR AYTNPDNPLR
ASIVSDPAGS RKNTKDNTPS VVHIDMVPGN HIEVAIAAKG GGSENKAKMV MLNPSDDIAA
WVEKTLPTMG AGWCPPGMLG IGIGGTAEKA AVLAKEALME SVDIHELMAR GAQTTEEKLR
LDIFERANSL GIGAQGLGGL TTVLDVKIKS APTHAASKPV VMIPNCAATR HVHFHLDGSG
PAELTPPSLS DWPEITREVG DDVRRVNLDT VTQADIEQWQ SGETILLSGK MLTGRDAAHK
RIQSLIESGE GLPEGVDFTG KFIYYVGPVD PVGTEVVGPA GPTTATRMDK FTDLMLEKTG
LMGMIGKAER GPATVESIKK HKAVYLMAVG GAAYLVSKAI KHSRVVAFAD LGMEAIYEFD
VQDMPVTVAV DSNGVNAHET GPAIWKVNIA NAKA
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