| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1907 |
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| Symbol | |
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| ID | 4841986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2214207 |
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| End bp | 2218088 |
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| Gene Length | 3882 bp |
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| Protein Length | 1293 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640119128 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001050282 |
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| Protein GI | 126174133 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATTTGA ACTCAGACAA ACATCCGCTA TCGAACGCCT TTCTTAATCT TTGTTATCAG
GCTGATGCGT CTAGGATCCG TCGTCGTTTA TTTAAGCTCA ATAAAGAAGC CGACTCAGAT
AAAAAGACCC AAGTCTTAGC CCAGCTGAGT GAGCAAGCGC AGGCGGCGTT TGAGAAGGTT
GAGCAGCGCC GTAACGCTCG CCCTAAAATC CAATATCCTG AAAACCTTCC CGTTTCTTTG
ATGCGCGATG ACATTGCGCG CGCGATTGCG GGCAATCAAG TGGTGATCAT TGCCGGTGAA
ACGGGCTCAG GTAAAACCAC GCAGCTCCCC AAAATTTGTT TAGAACTCGG CTTAGGTTGC
CGTGGCATGA TTGGCCACAC CCAGCCAAGA CGATTGGCTG CGCGCAGCGT GGCGAGCCGA
GTTGCTGAAG AATTACAAAG CCCGCTCGGT GAAGTGGTCG GCTTTAAAGT GCGGTTTGCC
GATGCGCTTA AGAGTGACTC TTATATTAAG TTGATGACCG ACGGTATTTT ACTGGCGGAA
TTGACCTCAG ATCGCAATCT CGACCAATAC GATACCATCA TCATAGATGA GGCCCACGAG
CGCAGCCTCA ACATCGATTT TATTCTGGGC TACCTTAAAC AGATCCTTAA AAGACGCCCC
GATCTCAAAG TCATCATCAC GTCGGCGACC ATAGACGTTG AGCGTTTTTC TAAGCATTTC
AACAATGCGC CGATTATCGA AGTGTCGGGC CGTACCTTTC CGGTTGAAAC CCGTTACCGA
CCCTTAGTGC AAGATAGCGA TGCCGATTTA GATCAAATTG AAGGCATTTT TGCCGCCGTC
GATGAGCTGG TGGCCGAAGG GCTGGGCGAC ATTCTGATCT TTATGAACGG CGAGCGGGAA
ATTCGCGATA CGGCCGAACA ATTAAGTCGG CGTAATTACC GCGATACCGA AATTTTGCCG
CTGTACGCGC GTTTGTCCTA TGGCGAGCAG TCCAAAGTCT TCAGTAGTCA CAGAGGTCGG
CGGATTGTAC TAGCGACCAA CGTGGCGGAA ACCTCGCTGA CTGTGCCGGG TATTCGCTAC
GTTATCGACC CAGGTACGGC GCGTATCAGC CGCTATAGCT ATCGCACTAA GGTGCAACGC
TTACCAATTG AACCTATCTC GCAGGCAAGC GCTAATCAGC GCCAAGGCCG TTGTGGTCGT
GTGGGACCGG GTATTTGTAT TCGTTTGTAC GATGAGGCGG ATTTTAATAA TCGTCCGGCG
TTTACCGATC CTGAAATTTT GCGCACTAAC TTGGCCTCGG TCATTTTGCA GATGCTCGCC
ATCGGTTTGG GTGATATCGG CGGCTTCCCG TTTATCGAGC CACCCGATCC ACGCCATATC
CGCGATGGTT TCTTGCTGCT CGAAGAATTA CAAGCGGTTG AGAGCAAACA CGGCAAGCTA
GTATTGACGC CACTTGGGCG TAATTTGGCG CAAATTCCTG TGGATCCGCG TTTGGCGCGT
ATGGTGGTTG AGAGTCAGCA GTTAGGTTGT TTGAACGAAG TGCTGGTGAT TGCTGCGGGC
TTATCAATTC AAGATCCCCG CGAGCGTCCG ATGGAGAAGA AGCAAGCCAG TGATGAAGCC
CATCGCCGTT TTGCCGATCC CAGTTCCGAT TTCGTTAGTT GGATAAATCT GTGGCAGCAC
TTAAAAGATC AGCAAAAAGA GTTATCTGCT AGTCAGTTCC GTAAAAAATG CCGCGATGAG
TATTTGGCCT ATTTGCGCGT TCGCGAGTGG CAGGATTTAT ACGCCCAGCT TAAACAAGCT
GTACACGATT TAAAATGGCG CTTAAACGAT ACGCCCCCAA GTTACGATAC CTTGCACCGT
GCGCTGTTGT CGGGCTTGTT GAGCCATGTT GGTTTTAAAG ATAACAATAA CGAGTATTTA
GGTGCGCGTA ATCGTAAATT CTTTGTGTTT CCCGGTTCGC CGTTGGCCAA AAAAGGCCCT
AAGTGGATCA TGGCCGCTGA GCTTACCGAA ACATCGCGCT TATTCGCTCG CTGCTGCGCC
AAAATCGAAC CCGAATGGCT AGAGCCCTTA GCGGCGCATT TGATTAAGAA AAGCTATGTA
GAGCCCCATT TTGAGGCAAA ACCTGGCAGC GTTATCGCCC TTGAGAATCA AGTGCTCTAC
GGCTTGACGG TTGTACACCG TCGCAAAGTG CAATACGGCC CCATCGATCC CGTTGAAGCG
CGTGAGATTT TTATCCGCAG CGCTTTGGCA GAAGGGCAGT TGCAAACCCA AGAAGCGTTT
TTTGTCGCTA ACCAAAAGCT GCTAGAAGAC ATTGAATCAC TTGAGCATAA ATCCCGTCGC
CGCGATATTT TGGTGGACGA GCAAGTGTTG GTGGACTTTT ACGAGCCGCG GATCCCCGAG
GGGATTTACA ACGCCCAGCT GTTTTTTGGC TGGTGGAAGA AGGCCAAGCG CGAGCAACCG
GATTTACTCG ATTTCAGCAA AGCGTTGTTA ATGCAGCGCA ATGCCGACCA TATTTCGACC
TTGGATTTCC CCGATACATG GCACAAGGGC AATTTGCGCC TGCAGCTGAG TTATCACTTT
GAACCCGCTG CGGCGGATGA CGGCGTGTCG GTGCACATTC CGGTGGCGCT GCTCAATCAA
ATCGACGATA GCGATTTTGA TTGGTTAGTG GCGGGGCTGA GGGAAGAAAA GTGCATCGCG
CTGATCAAAT CTTTGCCTAA GAGTTTACGA CGTAACTTTG TGCCCGCGCC TGACTATGCC
CGCGCTTGTG TGCAGGCCAT GGTGCCTTTT AGTGCCAGTT TGCTTGAGGC CATGTGCAAG
CAATTATTGC GCATGAGTGG CACGCGTATA TCGCCGGAAG ATTTTGATTT AACGCAACTG
CCTGCGCATT TGCAGATGAA CTTTAAAATC GAAGACGATA AAAACAACTT AGTCGCCGAA
GGTCGGGTGC TCGATACCTT AAAAGCCGAG TTGCAGGGCG TGGTGGCGAA GGCCATTCGT
CAGGTGGCGG ATAAAGGTAT AGAGCAAGAA GCGTTAACTG AGTGGTCCTT TGGCGATTTG
CCGCAGCAAT ATCAGCAGCA AAAAGGCAAT TACCAAGTAC GGGCGTTTCC GGCGCTGATC
GATAAAAAAG ACAGTGTTGC GATCAAATTA TTTGATGATG AATTTGAAGC CTTAGATGCT
CATCGCCAAG GTCTGCGACG CTTGTTGCTG TTAAACATTC CATCACCGGT AAAACATTTA
CAGCAAGCTT TGCCGAATAA GGCGAAATTG GCGATGTATT TCAATCCTTT TGGTCAAGTA
CAAATCTTGA TTGATGACAT TATTGCCGCC GCTGTACAGC AATTATTGGA TGAAAAAGCC
CTCGATGTGC GTAATCAAGC CCAATTTGAG CAGGCAAAGG ATTGGGTTCG CCAAGAGCTC
AACCCGACCG CCGAGCAAAT TGCCCTGAAG GTTGAGCAGA TTTTGACCTT ATACCAGAGC
ATTAAGAAGC GTCTCAAGGG CAAAATTAGC TTAGATATCG CTTTTGCTAT GAGTGATATT
CAAAGCCAAT TAGACAAATT AGTGTTTAAA GGGTTTGTTG AATCCTGCGG TTGGAATCGT
TTAGCCGATG TGGCGCGTTA CTTAAAAGCG ATTGAAATAC GTGTCGAGAA GTTACCTGTC
GATCCAACTC GCGACCGTTT GCATATGCAG AGTATTAACA AGGTGCAGGA AGCATTGAAC
GCACAATTGG CGAAAGTGCC ACGATCGCAG CCGACACCGC CCGCGTTAAT TGAAGCGCGC
TGGATGATTG AAGAGTATCG CGTCTCCTGT TTTGCGCAGG TGTTAGGCAC GGCTTATCCG
ATATCGGAAA AACGCATTTT GAATCATATT CAACAGGTCT AA
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| Protein sequence | MDLNSDKHPL SNAFLNLCYQ ADASRIRRRL FKLNKEADSD KKTQVLAQLS EQAQAAFEKV
EQRRNARPKI QYPENLPVSL MRDDIARAIA GNQVVIIAGE TGSGKTTQLP KICLELGLGC
RGMIGHTQPR RLAARSVASR VAEELQSPLG EVVGFKVRFA DALKSDSYIK LMTDGILLAE
LTSDRNLDQY DTIIIDEAHE RSLNIDFILG YLKQILKRRP DLKVIITSAT IDVERFSKHF
NNAPIIEVSG RTFPVETRYR PLVQDSDADL DQIEGIFAAV DELVAEGLGD ILIFMNGERE
IRDTAEQLSR RNYRDTEILP LYARLSYGEQ SKVFSSHRGR RIVLATNVAE TSLTVPGIRY
VIDPGTARIS RYSYRTKVQR LPIEPISQAS ANQRQGRCGR VGPGICIRLY DEADFNNRPA
FTDPEILRTN LASVILQMLA IGLGDIGGFP FIEPPDPRHI RDGFLLLEEL QAVESKHGKL
VLTPLGRNLA QIPVDPRLAR MVVESQQLGC LNEVLVIAAG LSIQDPRERP MEKKQASDEA
HRRFADPSSD FVSWINLWQH LKDQQKELSA SQFRKKCRDE YLAYLRVREW QDLYAQLKQA
VHDLKWRLND TPPSYDTLHR ALLSGLLSHV GFKDNNNEYL GARNRKFFVF PGSPLAKKGP
KWIMAAELTE TSRLFARCCA KIEPEWLEPL AAHLIKKSYV EPHFEAKPGS VIALENQVLY
GLTVVHRRKV QYGPIDPVEA REIFIRSALA EGQLQTQEAF FVANQKLLED IESLEHKSRR
RDILVDEQVL VDFYEPRIPE GIYNAQLFFG WWKKAKREQP DLLDFSKALL MQRNADHIST
LDFPDTWHKG NLRLQLSYHF EPAAADDGVS VHIPVALLNQ IDDSDFDWLV AGLREEKCIA
LIKSLPKSLR RNFVPAPDYA RACVQAMVPF SASLLEAMCK QLLRMSGTRI SPEDFDLTQL
PAHLQMNFKI EDDKNNLVAE GRVLDTLKAE LQGVVAKAIR QVADKGIEQE ALTEWSFGDL
PQQYQQQKGN YQVRAFPALI DKKDSVAIKL FDDEFEALDA HRQGLRRLLL LNIPSPVKHL
QQALPNKAKL AMYFNPFGQV QILIDDIIAA AVQQLLDEKA LDVRNQAQFE QAKDWVRQEL
NPTAEQIALK VEQILTLYQS IKKRLKGKIS LDIAFAMSDI QSQLDKLVFK GFVESCGWNR
LADVARYLKA IEIRVEKLPV DPTRDRLHMQ SINKVQEALN AQLAKVPRSQ PTPPALIEAR
WMIEEYRVSC FAQVLGTAYP ISEKRILNHI QQV
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