Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1905 |
Symbol | |
ID | 4841984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 2212211 |
End bp | 2213500 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640119126 |
Product | membrane protein |
Protein accession | YP_001050280 |
Protein GI | 126174131 |
COG category | [S] Function unknown |
COG ID | [COG4325] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCTA CCGTGTTAAC CGACCGCGTC AGAGTTTTCC TCAATCGGTT TCGCCATCGA CTTTGGGTTA AACCACTGCT TGTTTGCCTA TTATCGATTG CAGTCGCCTT TGTCGCAAAA TTGGCAGATG GTACTGAGCT TGTTGAGATT GCACCTAAGG TGTCATCGGC CTCCATCGAG GCGCTGTTAT CCGTTATGGC TTCCAGCATG CTGGTTATCG CCACTTTTTC CGTGGGTTCT ATGGTCTCGG CCTATGCTTC GGCGGCTAAC ACGGCAACAC CACGTTCATT TATTTTAGTT GTCGCCGATG ATGCCTCTCA AAATGCGCTA TCGACCTTTG TTGGGGCATT TATCTTCAGT ATTGTGGCAC TCACTGCGGT CAAAAATGAT TACTTTCAAA CTGCGGGTCT GTTTATCCTC TTCCTGCTGA CCACGTTTAT TTTTGGCATG GTGATCTTTA CCTTTGTACG TTGGGTGGAT CGCATTGCCC GTCTTGGCCG CATGGCAACC ACAATTGAGA AAGTTGAAAA GGCGGCGGCA GATGCCCTGA CACGGCGACG CAATACTCCA CATCTTGGCG GCGTTTCAGT ACGTCCCCAA GCGCGTGGAC GAGCCGTGTA CGCGGCTAAC GTCGGTTATG TTCAGTACAT TGATATTGCT GCGATGCAGC GCTGGGCAGA GAAAAACGAG GTGCGAGTCG TGATTGCAGC CTTGCCGGGC ACGTTCGCCA CGCCCAATCG ACCATTGGCA TACATTAGCG CCGATGGTGC GGAGCAGACT GAGATTGATT GCACCTGTGT TGCCGAGTCA TTCCAGATTG GCGATACCCG TCTTTTTGAC GACGATCCGA GATTTGGGTT GGTGGTACTG TCGGAAATCG CTGGCCGCGC CTTATCACCC GCGGTCAATG ACCCTGGTAC GGCCATTTGC ATTATAGGCA CACTGGTACG GCTGTTTACC CTATGGGGTG AACCCGCGGC AGTTGATGAC AAACCCGCGC CAGAGTGCGA TCGCGTAGAA GTCCCTCACG TTTGTGTACA GGACATGTTT GATGATGCGT TTACCGCCAT AGCCAGAGAC GGCGCGGGAG TGGTGGAAGT CTCTGTACGG CTACAAAAAG CGCTTGAATC GTTAGCATCC AGTGGTGACG GGGAAATACG CGCGGCGGCC GAGTACCACG GTCGGTTAGC ACTGAAGCGT TCACAAAAAA TGCTTGATAT CGAAGAGGAC TTGCAAGCCG TACAAGACGC CGCCAAGTTT GCCGAGTCAG CAGCTTCGTC TAACACTTAA
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Protein sequence | MISTVLTDRV RVFLNRFRHR LWVKPLLVCL LSIAVAFVAK LADGTELVEI APKVSSASIE ALLSVMASSM LVIATFSVGS MVSAYASAAN TATPRSFILV VADDASQNAL STFVGAFIFS IVALTAVKND YFQTAGLFIL FLLTTFIFGM VIFTFVRWVD RIARLGRMAT TIEKVEKAAA DALTRRRNTP HLGGVSVRPQ ARGRAVYAAN VGYVQYIDIA AMQRWAEKNE VRVVIAALPG TFATPNRPLA YISADGAEQT EIDCTCVAES FQIGDTRLFD DDPRFGLVVL SEIAGRALSP AVNDPGTAIC IIGTLVRLFT LWGEPAAVDD KPAPECDRVE VPHVCVQDMF DDAFTAIARD GAGVVEVSVR LQKALESLAS SGDGEIRAAA EYHGRLALKR SQKMLDIEED LQAVQDAAKF AESAASSNT
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