| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1894 |
|---|
| Symbol | |
|---|
| ID | 4841973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 2194732 |
|---|
| End bp | 2195391 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640119115 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001050269 |
|---|
| Protein GI | 126174120 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000765732 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTA TGTTGGTTGA AGACAATGAG TTATTGGCTC AAGGGATTTG CTTAAGTTTG
GCAAAGCTGG GCATGCAGGT TGATCACCTT AATAGTTATC AGCAAGCATT ACAGGGTGTT
AAAAATGAAA GCTTCAGTGC CATAGTGCTC GATCTGGGTT TACCCGACGG TAACGGTAAA
GAGTTACTTA AAGCTTGGCG TCAGCAGGGA GTGTCAATTC CTACAATAGT CCTGACCGCC
AATACGGATT TTGACACTAA GCTCGAATGC TTAGACATGG GCGCCGATGA TTATCTCGGT
AAACCCTTCG ATGTGCGTGA ATTGGCCGCG CGCATTCGCG CCATCGTCAG ACGCCAGTAC
GGGCTCGATC ACAACAGTTT GATTATTGGT GCGCTGTGCA TTGATTTAAA TACCCGCGAA
GTGACCTTTC GCGATCAAAA TGTGCTGCTT TCGCGGCGTG AATTCCAATT ATTGCTTGAA
CTCGCACAAT CAGCTGGGCG CGTATTGACG CGCAGCCAAC TGGAACAGTT AACCTATGGC
TGGGATGAAG TCGGCAGCAA TTCGATAGAA GTGCATATCC ATCATCTGCG TAAAAAGCTC
GCCAATGAGC TGATTAAAAC CGTGCGTGGA ATCGGCTATA CCTTGATTGA AATAAATTAA
|
|---|
| Protein sequence | MRIMLVEDNE LLAQGICLSL AKLGMQVDHL NSYQQALQGV KNESFSAIVL DLGLPDGNGK
ELLKAWRQQG VSIPTIVLTA NTDFDTKLEC LDMGADDYLG KPFDVRELAA RIRAIVRRQY
GLDHNSLIIG ALCIDLNTRE VTFRDQNVLL SRREFQLLLE LAQSAGRVLT RSQLEQLTYG
WDEVGSNSIE VHIHHLRKKL ANELIKTVRG IGYTLIEIN
|
|---|
| |