Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1844 |
Symbol | |
ID | 4845688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 2143241 |
End bp | 2143945 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640119065 |
Product | sortase family protein |
Protein accession | YP_001050219 |
Protein GI | 126174070 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0536686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAG GCAGAACGCA GCGATTTTTA GTGGTGGGAT TATTTTTAAT TGGCGCAACA TTGTTAGGAA AGGGACTCTA TATGCAAGCT AAAGCACACT TTGCCCAGTA TTTGATTGAA CAGGCGTGGA CTAAAACCTT AGCCGATGGA CAATCTCATA AGCCTTGGTC ATGGGCGGAT ACTTATCCCG TGGCAAAGCT GTCGATTTAC CGCGAGCAAG CGGCTAACAA CCATATTGAA GCCGAGCTTA ATGACAGTTT ATATGTGTTG GCGGGGGCTT CAGGGCGAAA TTTGGCCTTT GGTCCGAGTC TGGTATTGTC CAGCGCGCCA GCGGGGCAAA AGGGCAATAC TGTGATTGCC GGTCACAGGG ACACACATTT TGCGATCCTC AATGGCATGG CGGTAGGGCG TCGATTATCG TTGCAGACGC TTAAGGGAAA TCACATTATT TATGAAGTAG TTGCGACTCA GGTGGTGCAT GAAACTGAAA CGCAGTTTAT GGCGCCATCC GATGATAATC GCTTAACCTT AATCACTTGT TATCCCTTCG ATGCGCTTCA AGGTGGCGCC GAACTGCGCT TTGTGGTGCA GGCGATACCG GTTGAGGATG AATCAATGAA TACGGCTAGT GCCGATGTTT CAGCTTCAAT TGGTAATGGG ATGCAAGGGA AGGTCGCTTC TGGAACGCGC AGTTTCACCC ATTAG
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Protein sequence | MSKGRTQRFL VVGLFLIGAT LLGKGLYMQA KAHFAQYLIE QAWTKTLADG QSHKPWSWAD TYPVAKLSIY REQAANNHIE AELNDSLYVL AGASGRNLAF GPSLVLSSAP AGQKGNTVIA GHRDTHFAIL NGMAVGRRLS LQTLKGNHII YEVVATQVVH ETETQFMAPS DDNRLTLITC YPFDALQGGA ELRFVVQAIP VEDESMNTAS ADVSASIGNG MQGKVASGTR SFTH
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