| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1841 |
|---|
| Symbol | |
|---|
| ID | 4845685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 2138200 |
|---|
| End bp | 2139546 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640119062 |
|---|
| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
|---|
| Protein accession | YP_001050216 |
|---|
| Protein GI | 126174067 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3344] Retron-type reverse transcriptase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCAAACT TGTCGATACC CACTACGTCG CCAGACGATT ACTATCGGCA GCGTATTGAT
ATGCAACCGG CCTTCAACAG CGATTTATTC CAACAACTAC TCGAACCTGA AAATCTACAC
CGAGCTTGGC GTCAAGTTAA AGCCAATAAA GGCGCGGCTG GCATCGATGG CATGACTATC
GAAGCCTTCC CGCTTTGGAT GCAACAAGGC GGTTGGCAAC GGTGTAAATC TCTACTGGAA
CGAGGTGAAT ATAACCCTTC AGCAGTCAGA CGCGTAGAGA TCGACAAACC CGATGGCGGT
AAACGCAAAC TGGGTATCCC TAACGTCATT GATCGTGTGA TACAGCAAGC TATTGCTCAA
ATTCTCACGC CGTTGTTTGA CCCTTTCTTC TCGGCTAATA GCTTCGGCTT TAGACCGAAT
AGGAATGCCA AACAAGCGGT CTTGCAAGTC AGAGATATCA TCAAACAGAA GCGCAAATTT
GCCGTCGATG TTGATCTGTC CAAGTTCTTT GATCGAGTAA ATCACGACCT GTTGATGACT
CAATTGAGGA TCAAGGTACA GGATAAGCGT CTGCTGGCGC TTATTGGTAA ATACCTGCGA
GCTGGTGTGA CGGTCAACGA CCAATTTGAA GCAAGCTTCG AAGGCGTGCC TCAAGGCGGC
CCACTCTCGC CATTACTCTC TAACATTATG CTGGATAGTC TTGATAAAGA GCTGGAAAGC
CGAGGGCACA AATTCGCCCG CTACGCGGAC GACTTTATCA TTTTGGTAAA GTCTATTCGA
GCGGGAGAGC GGGTACTCAA GAGTATTACT CGCTACCTTG CCACTAAGCT AAAACTGGTT
GTTAATGAAC AGAAAAGCCA AGTGGTAGAG GTAGGTCAAA GCAAGTTCCT CGGTTTTACC
TTTAACCGCG GGAAGATCCA GTGGCATGCT AAAACATTAC ACATTTTTAA ACAAAAGATG
AAACGCCTGA CGAACCGAAA TTGGGGCGTT AGCATGGGAT ATCAATTGTT TAAAGTACGG
CAATACATGC AAGGCTGGAT CAACTACTTT GGCATAGCCA ACGCTTATCA AGGGTGTGTC
GATTTAGACC ATTGGATCCG TCGTCGCGTA CGTATGTGCT ACTGGCGTCA GTGGCGAAAA
CCACGGACTA AGGTGCAGAA TTTACTTAAG CGTGGCGTCA GGATCCAAGC CGCTGTTGGT
TGTGGGATCA CAAGTAAAGG TCCATGGCGA AGTTCGAAAA CACCCGGGAT ACAGCAAGCG
CTGAGTAATG ACTATCTTAA GAAAGCAGGT TTATGTTCAC TAAGAGATGG ATGGATCGCA
GTTCATTACC CTAACCAGAA AGTTTAG
|
|---|
| Protein sequence | MSNLSIPTTS PDDYYRQRID MQPAFNSDLF QQLLEPENLH RAWRQVKANK GAAGIDGMTI
EAFPLWMQQG GWQRCKSLLE RGEYNPSAVR RVEIDKPDGG KRKLGIPNVI DRVIQQAIAQ
ILTPLFDPFF SANSFGFRPN RNAKQAVLQV RDIIKQKRKF AVDVDLSKFF DRVNHDLLMT
QLRIKVQDKR LLALIGKYLR AGVTVNDQFE ASFEGVPQGG PLSPLLSNIM LDSLDKELES
RGHKFARYAD DFIILVKSIR AGERVLKSIT RYLATKLKLV VNEQKSQVVE VGQSKFLGFT
FNRGKIQWHA KTLHIFKQKM KRLTNRNWGV SMGYQLFKVR QYMQGWINYF GIANAYQGCV
DLDHWIRRRV RMCYWRQWRK PRTKVQNLLK RGVRIQAAVG CGITSKGPWR SSKTPGIQQA
LSNDYLKKAG LCSLRDGWIA VHYPNQKV
|
|---|
| |