| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1802 |
|---|
| Symbol | |
|---|
| ID | 4843543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 2095748 |
|---|
| End bp | 2097979 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640119024 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001050178 |
|---|
| Protein GI | 126174029 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAACA GTAAAACGCT AAACAGTTAC ACGTCAAAAC GTCATTCCCC GTTTTCAACC
GTATCACCCA GCTTGTTTTT AACCCGAGCG CCGCTGGCGT TAGCTATTGC TTCCGCGCTG
AGCACTTCTG CATTTGCACA AACCGATGCT ATTGATAAAC CCGATCCCAG CACTGAGATG
GAAGTCATGG TGGTGACGGC GGATTTTCGC AGTTCAAGCT TAGAAAAAAT GCCTTCCAGT
ATTACCGTTA TCGACAGTCA AAAAATTCAA GATGAAAGCG CGCAGCACTT TGAAGATCTG
CTTAATTCTA TTGCCAATTT TAACTGGTCA GGTGGAAGTT CGCGGCCGAA ATATTTTCAA
ATTCGCGGCG TAGGTGAGCA AGAGCAATAC CAAGGTGCAC CTAATTCTTC TGTAGGTTAC
ATCATAGATG ATATCGATTT ATCCGGTATT GGCATGGTGT CGAGTATGTA CGATCTACAA
CAGGTCGAAG TGTTACGTGG ACCACAGGGC ACACGTTATG GCGCGAATGC TTTAGCGGGA
CTGATTTATC TGAAAAGTAA CGACCCCACC GATGTGTTTG AACATGGCGC AGAAGTCTCG
TTAGGTGATG ATGATTTACG CACGTTTAGC GGTTTCAGTT CAGGTCCATT AACCGATTCT
GGCAAGCTGC TTTATCGCGT GTCACTGCAG CAACATCAAC AAAATGGTTA CCACGACAAC
CTCTATTTAG GTCGTGACGA TACCAATGGC CGCGATGAGT TCAGCGGCCG CGCTAAGCTG
CGCTGGTATG CGACTGACGA TTTGCAGTTT GATTTAACTG TGCTGCACGC CGATTTTGAT
AATGGCTATG ATGTGTGGAG TTTAACCAAT TCACCGACCC AGACGACATC GGATCAACCG
GGTGTCGATA GCCAGCGCAC CACAGGCGCA GGCTTTAAAG CGACCTATTC TGGCGCCGAA
ACCTTTGAGC TAACCTCGTT AACGTCCTTT GCGAATACCG ATCACCATTA CAGTTACGAT
GGCGATTGGT CGAACCCAGA GTATTGGGCT TCTAAGCAAT GCAGTGAGAA TAGTAATCTG
GCGCCGTGCC AATATGATTA TTTTTGGGAT AAAACTGGCC AACGTAAAAC TGTGTCGCAA
GAGTTTCGCT TAAGTTCTAC CGAGCAGGGC CGAATCTTTG CGGACAGTAC TGATTGGTTG
CTTGGTGTGT ACGGCATGAA TCTGAAAGAA GATAACCAAT TGTATTCTGA GTACAATGCT
TGGCCGGATG AAGTCTTAGA CTCTGAGTAT GAAGCGACGA ACTATGCCTT GTTTGGTCAG
CTCGATACGG ATCAGGGCTC AGATTATGCC TTATCTGTGG GCCTACGTTT GGAGCGCCGC
AACAGCCATT ACTCAGATAC GAATAACGAT AATTTCGACC CGAGTGAAAC CATGTGGGGT
GGTCATATTG CTGTGAGTAA AGTGCTGAAT GACTCACACA ACGCATATGT CCGTGTCGCA
CGCGGTTACA AGGCGGGCGG TTTTAACATG ACTTTGCCTG TCGAATTGAA CGATAAAAAA
GAGTTCAGCA CTGAGACGCT TTATAACTAT GAAATCGGTC TGAAATCCCA TTGGCTAGCA
GGGCTTATCG ATACTAATTT GGCGCTGTTC TATATGGACA GACAAGATCA ACAGGTGGCG
GCATCCCAGC AAGACCCTGA TAAACCTCAG CGTTTTATCT TGTTCACCGA AAACGCTGGT
AGTTCTAATA ACTATGGTGC TGAGTTAGAT GCGACCTGGT ATGCCACGGA TAATCTACAA
ATTTACTCAA GCTTAGGTTG GTTAGAAACG GCCTACGGTG ACTACCAGTA TCAGGATAAA
TACGGCACTG AGGTCGATTT ATCTGGCCGC GATCTGGCCC ATTCACCACA CTTAACCTAC
AGCCTTGGCG GGACTTATCG TACCAATTCG GGCTGGTTTA CTAACCTAAA CCTGAGCGGT
AAGAGTGAGT TTTACTATTC CGACAGCAAT GAATCCCGCT CTGAGCCCTA CACTATCGTC
AATGCCCGCG TGGGTTATGA GGCGAGTGCG TGGTCAGCCT ATTTATGGGG TCGTAATTTG
TTCAATGAAG AATACGGTGT GCGCGGCTTC TACTTCGGTA ACGAGCCTGA TAATGGCTGG
GCTGAAAAGC AATATATTCG TTACGGCGAT CCGCGTCAGA TTGGCGTAAC CTTTAACGTT
AAGTTTATGT AA
|
|---|
| Protein sequence | MLNSKTLNSY TSKRHSPFST VSPSLFLTRA PLALAIASAL STSAFAQTDA IDKPDPSTEM
EVMVVTADFR SSSLEKMPSS ITVIDSQKIQ DESAQHFEDL LNSIANFNWS GGSSRPKYFQ
IRGVGEQEQY QGAPNSSVGY IIDDIDLSGI GMVSSMYDLQ QVEVLRGPQG TRYGANALAG
LIYLKSNDPT DVFEHGAEVS LGDDDLRTFS GFSSGPLTDS GKLLYRVSLQ QHQQNGYHDN
LYLGRDDTNG RDEFSGRAKL RWYATDDLQF DLTVLHADFD NGYDVWSLTN SPTQTTSDQP
GVDSQRTTGA GFKATYSGAE TFELTSLTSF ANTDHHYSYD GDWSNPEYWA SKQCSENSNL
APCQYDYFWD KTGQRKTVSQ EFRLSSTEQG RIFADSTDWL LGVYGMNLKE DNQLYSEYNA
WPDEVLDSEY EATNYALFGQ LDTDQGSDYA LSVGLRLERR NSHYSDTNND NFDPSETMWG
GHIAVSKVLN DSHNAYVRVA RGYKAGGFNM TLPVELNDKK EFSTETLYNY EIGLKSHWLA
GLIDTNLALF YMDRQDQQVA ASQQDPDKPQ RFILFTENAG SSNNYGAELD ATWYATDNLQ
IYSSLGWLET AYGDYQYQDK YGTEVDLSGR DLAHSPHLTY SLGGTYRTNS GWFTNLNLSG
KSEFYYSDSN ESRSEPYTIV NARVGYEASA WSAYLWGRNL FNEEYGVRGF YFGNEPDNGW
AEKQYIRYGD PRQIGVTFNV KFM
|
|---|
| |