Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1749 |
Symbol | |
ID | 4841708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 2034944 |
End bp | 2036107 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640118973 |
Product | porin |
Protein accession | YP_001050127 |
Protein GI | 126173978 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0474963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAAG CAAAACTAAG CTTGATGGGT AGTGCAATAT TATTGGCATT AGCAAGTTCG GCCAATGCGG CATCACTAAA AGATACGGAT GTTGAGTTTG GCGGTTATAT CAAAGCTGAC ATTATGTTCA GTGATTATGG CAATGGCGCA CCGGATTCGG GGGATATCTC TAGGCAGTTT TATGTTCCTG GCACTATTTA TGGAAAAGAG GGTAATGGCA ATCAAGTCGT GGATTTTCAA GCTCGCGAAA CGCGTTTTAA TTTCAAAGCG ACGACCGATG TTGATGGTCA TAAACTTTCT GGCTTTATTG AACTCGATTT TATGACCCAC ACCGATGGCA ATGAACGCAC TTCCAACAGC TATTCGCCTC GTATTCGCCA TGCATTTGTC TCCTATGACA ATTGGACCGT AGGTCAAACG TGGACCACCT TCCAAAATGC TGCGGCATTG CCTGAGAATC TCGATTTTGT TGGTGCTGCC GATGGCACCC CGTTCGCACG CCAAACGCTA TTGCGCTATA CCCAAGGTAA TTTCCAATTC GCGATTGAAA ATCCTGAAAC CACAGTCACG CCAAATCAAG GCGGTGCCCG TATTACCAGT GGTAGCGGAG TAATCCCCGA TGTTATCGCG CGGTATAACC TCAAAACAGA CGGCGGTGCA GCGTTCTCCT TTGCGGGTAT TATTCGTCAG TTGAATTTAG AAACTAAGAT AGGTGCGACG CAGATTGATA GCTCAGCCCT AGGATATGGC GCAAGTGTGG CGGGCATTAT TCCGGTCGGC AAAGATGATC TTCGCTTCAC GGCCACCTAT GGTGAAGGCT TAGGTCGTTA TATGGCACTC AATTACATTA ATGCGGGTGT GCTGGATGCT AACGGTGACA TCGAGTCGAT TCGTACTTTC GGTGGATTTG TGTCTTACCG TCATTGGTGG AATGAGCAGT GGCGCAGCAG TGTAACCTTG TCAGGCATGC AAGCGGATAA CGATGTGGCT TTAACCGGTT CAGGCGTGAA TAAGGATGCT TATTCAGGCT ATATCAACTT ACTTTACTCG CCAAGCAAAC CGCTGACCTT TGGGGTCGAG TATATGTACG CCAAGAACAG TAAAGAAAAT GGTGATGATG GTGATTTGAG CCGTATCATG TTCTCGGCTA AGTATGTGCT CTAA
|
Protein sequence | MKQAKLSLMG SAILLALASS ANAASLKDTD VEFGGYIKAD IMFSDYGNGA PDSGDISRQF YVPGTIYGKE GNGNQVVDFQ ARETRFNFKA TTDVDGHKLS GFIELDFMTH TDGNERTSNS YSPRIRHAFV SYDNWTVGQT WTTFQNAAAL PENLDFVGAA DGTPFARQTL LRYTQGNFQF AIENPETTVT PNQGGARITS GSGVIPDVIA RYNLKTDGGA AFSFAGIIRQ LNLETKIGAT QIDSSALGYG ASVAGIIPVG KDDLRFTATY GEGLGRYMAL NYINAGVLDA NGDIESIRTF GGFVSYRHWW NEQWRSSVTL SGMQADNDVA LTGSGVNKDA YSGYINLLYS PSKPLTFGVE YMYAKNSKEN GDDGDLSRIM FSAKYVL
|
| |