| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1711 |
|---|
| Symbol | |
|---|
| ID | 4845520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 1992680 |
|---|
| End bp | 1993669 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640118926 |
|---|
| Product | RluA family pseudouridine synthase |
|---|
| Protein accession | YP_001050089 |
|---|
| Protein GI | 126173940 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000334248 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCCG TTATAATTAG ATGGCGCATC ATGAATATAG AATCCACCCC ACAACAGGTT
CAGTTGATCA CGATTGATGA AGATCACTTC GAACAGCGTA TCGATAACTA CTTAATGACC
AAGCTGAAGG GCGTGCCGAA AAGCATGATC TATCGCATTG TCCGCAAGGG CGAGGTTCGA
GTGAATAAGA AACGTATTAA ACCCGAGTAC AAGTTGCAGA TTGGCGACAT AGTGCGTATT
CCGCCTGTCC GAGTGGCAGA GCCAGATAAC CGTACCGCAC CATCGCCTAA CTTAAGCAAA
GTCTCGCAAC TCGAAGACCG TATTTTGCAC GAAGACAATC ATTTGATCGT GCTGAATAAA
CCTGCTGGCA TTGCTGTGCA TGGTGGTAGT GGTGTCGATT ACGGTGTGAT TGAAGCATTG
CGTTCACTGC GTCCTCAACA AAAGTTTTTA GAGCTAGTAC ATCGTCTCGA TAAAGATACT
TCGGGTGTGT TGTTGGTGGC GAAAAAGCGT AGCGCACTTA AACATCTGCA TGATCAGCTC
AGATATAAAA AGATGCAGAA AGACTATTTG GCCTTAGTGA AAGGTGAATG GTCTGCTCAA
GATAAAGCCG TTAAACAGCC TTTATTAAAA ATCACCCTTA AATCCGGTGA GCGCATAGTG
CGTGTTAATG CGGAAGGTAA ACCTTCTGAA ACGCGCTTTA AAATTATGCA GCGTTACCAA
GGTTGTACTC TCGTGAAGGC AAGCCCTGTC ACTGGACGTA CTCACCAAAT TCGGGTGCAT
TGCCAATTTG CGGGTCATCC TATCGCCTGT GATGATAAAT ACAGCGAGCA AGGGTTTGAC
GACAGCATGC GTTCATTAGG CTTAACTCGA CTCTTTTTAC ATGCGGCTGA GTTGATGTTC
ATTCATCCTG AAAATGATGA AGTGATGCGG GTCTCTGCGC CTTTAGATGA AAACTTGTCG
CAGTTATTGG ATAAGTTAAA GCGTGTGTAA
|
|---|
| Protein sequence | MAAVIIRWRI MNIESTPQQV QLITIDEDHF EQRIDNYLMT KLKGVPKSMI YRIVRKGEVR
VNKKRIKPEY KLQIGDIVRI PPVRVAEPDN RTAPSPNLSK VSQLEDRILH EDNHLIVLNK
PAGIAVHGGS GVDYGVIEAL RSLRPQQKFL ELVHRLDKDT SGVLLVAKKR SALKHLHDQL
RYKKMQKDYL ALVKGEWSAQ DKAVKQPLLK ITLKSGERIV RVNAEGKPSE TRFKIMQRYQ
GCTLVKASPV TGRTHQIRVH CQFAGHPIAC DDKYSEQGFD DSMRSLGLTR LFLHAAELMF
IHPENDEVMR VSAPLDENLS QLLDKLKRV
|
|---|
| |