Gene Sbal_1683 details

Gene Information

• Locus tag: Sbal_1683
• ID: 4841779
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 1962350
• End bp: 1964158
• Gene Length: 1809 bp
• Protein Length: 602 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640118900
• Product: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
• Protein accession: YP_001050063
• Protein GI: 126173914
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components
• TIGRFAM ID: [TIGR02203] lipid A export permease/ATP-binding protein MsbA

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACAT CTCCTAAAGA CGAAATGTGG ACAGTTTTCA AACGATTACT GGGCTATATA 
AAACAGATGA AAGGCATGTT TATGCTTTCA GTTGCGGGAT TAATTATTTA TGGTCTCGTC 
GATGCCGCCT TTATCGCTTT CATCGGCCCC TTTATTGATA AGGGTTTTTC CGGCGGCGCA 
CCCGCTGCGG TCACCAATGG CATAGCATTG CCAACCAGTG AAGGTTTCCA CGCGAACAAC 
GACGTGCTAA TGATGGCGCC GCTTGTGGTT ATCGTCATGT TTTCCCTGCG TGGTTTTGCC 
AACTTTGTTT CGACCTACGG CATCTCATAC ATGAGTGCGC GTTTGATCAT GGACATGCGT 
CAGCAAGTGT TTGAGCATTA TCTGAGTCTG CCTGTCAGTT ACATGGACAA GGAAAATACC 
GGTAACTTGA TTTCAAAAGT CACCTTCGAT ACTGAGCAAA TCGCCAGAGC ATCGGGTAGC 
GCTTTGATTT CTATCGTCCG CGACAGTGTG ACTGTGTTTG GTATGCTGGC GCTGATGTTC 
TATAACTCTT GGAAGTTATC CCTGTGTATC TTAGTGATAG GGCCGATTAT GGGTATGGTC 
ATTGCTGTGG TCAGCCGTCG TTTCCGTAAG GTTTCTAAGC AAATTCAAAC CGCCATGGGC 
GGCGTGAGTG CCACGACTGA GCAAATGATT AAGGGCCATA AAAACGTGTT GGCCTTTGGT 
GGACAAGAAA CTGAAGCCAC CCGTTTTGCA AAAGTGAACG ATCAAAACCG TCATCAAAAT 
ATGAAGTTAG CTGTGGCGCA AGCCATTAGC CAGCCGTTGA TCATGATTAT CGGCTCATTC 
GCCTTGGCCT TTGTGCTCTA TGCGGCAAGT TTAGACAGCA TGAAAGCCGA TCTCACCGCC 
GGTACCTTCG CGACAATTCT TGGCGCTATG ATGGCCATGT TGCAACCCAT TAAAAACTTA 
ACCCGAGTGA ACGCCGAATT CCAACGGGGT ATTGCAGCTT GTACCACAGT GTTTGAATTA 
CTGGATACGC TGCCAGAATC CGACACCGGC ACTTATACCG TTGAGCGCGC TAAGGGTCAT 
TTACGTTTCG ATAAGGTCTG TTTTACCTAT GACAGCCAAG ACCGCCGAGC GCTAGAAGAT 
GTTGATTTTG AAGTTAAACC CGGGCAAACC TTAGCACTAG TCGGCCGTTC TGGTTCAGGC 
AAGTCGACTA TCGCCAGTCT AGTGACCCGT TTTTATACGG GGCTCGAATC CGGCGATATT 
CTGCTTGATG ATGTCAGCAT TTACGATTAC TCGCTAAAAT CGCTGCGTAA TCAAGTGGCT 
CTTGTATCGC AGCAGGTGAC CTTATTCAAC GATACGATTG CTAACAACAT CGCCTACGCC 
TATCCGGGTG AAGCCACTCG TGAGCAGATT ATTGAAGCCG CGACCTTGGC CTATGCGATG 
GAGTTTATTG ACCAGCTGCC CCAAGGCCTT GATACCCAAG TGGGTGAAAA TGGCGTGTTA 
TTGTCCGGTG GTCAAAGACA ACGTATCGCG ATTGCGCGCG CTATGTTGCG TGATGCGCCT 
GTCTTGATCC TCGATGAAGC GACCTCTGCG CTGGATACTG AGTCAGAAAA AGCGATTCAA 
AAAGGCTTAG ACAACCTCAG ACAAAACCGT ACCTCAGTAG TGATTGCCCA CAGGTTGTCG 
ACTATCGAGA GTGCCGATCA AATTTTAGTG GTGGATCAGG GACGTATCGT CGAGCGCGGG 
ACGCACCAAT CACTATTGGA ATTAAATGGC ATGTACGCCA AATTGTACCA AATGCAATTC 
GGTAGCTAG 

 

Protein sequence

MTTSPKDEMW TVFKRLLGYI KQMKGMFMLS VAGLIIYGLV DAAFIAFIGP FIDKGFSGGA 
PAAVTNGIAL PTSEGFHANN DVLMMAPLVV IVMFSLRGFA NFVSTYGISY MSARLIMDMR 
QQVFEHYLSL PVSYMDKENT GNLISKVTFD TEQIARASGS ALISIVRDSV TVFGMLALMF 
YNSWKLSLCI LVIGPIMGMV IAVVSRRFRK VSKQIQTAMG GVSATTEQMI KGHKNVLAFG 
GQETEATRFA KVNDQNRHQN MKLAVAQAIS QPLIMIIGSF ALAFVLYAAS LDSMKADLTA 
GTFATILGAM MAMLQPIKNL TRVNAEFQRG IAACTTVFEL LDTLPESDTG TYTVERAKGH 
LRFDKVCFTY DSQDRRALED VDFEVKPGQT LALVGRSGSG KSTIASLVTR FYTGLESGDI 
LLDDVSIYDY SLKSLRNQVA LVSQQVTLFN DTIANNIAYA YPGEATREQI IEAATLAYAM 
EFIDQLPQGL DTQVGENGVL LSGGQRQRIA IARAMLRDAP VLILDEATSA LDTESEKAIQ 
KGLDNLRQNR TSVVIAHRLS TIESADQILV VDQGRIVERG THQSLLELNG MYAKLYQMQF 
GS