Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1674 |
Symbol | |
ID | 4844769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 1953478 |
End bp | 1955175 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640118891 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_001050054 |
Protein GI | 126173905 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0178726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTGA TCCTATTATT GACCCAACAG ATGTCGCTGT ACTTAGTGAT CGTTTACTTA GTCAGTAAAA CGCCGCTGTT TAAACTGTTT GCCGAAACCT CCCCTCGTCT GCCACATAAG ATTTTTATGT ATCTGATTTT TTCAAGTTTC TGCATCATGG CCACCTATTT TGGTGAACAA ACATCAGGTG CGATTGCAAA TACCCGTGCT ATGGGCGCTG TGTTAGGTGG ATTATTAGGC GGGCCCGTTA CTGGTTTTCT GGTAGGACTA ACAGGTGGCC TTCACCGCTA CAGTATGGGC GGCTTTACTG AAATAGCCTG CGCCATTTCC ACCACCTTAG AAGGATTATC CGCTGGGATG ATAAGCTTCT ACTTAAGACG TGCGGGTAAA AGTGAGCTTA TCTACAATCC ATTACTCGTT TGCCTAGTGA CTTTTTATGC CGAAATGATG CAAATGAGCA TCATCTTACT GGTCGCCCGC CCCTTCGATG ATGCGTGGGA GTTAGTGCGT CAAATCGCGC CGCCCATGTT GTTAGTCAAT TCCGTGGGAG CGGCACTCTT TATGAGCATG ATCCGCGACC AAAAAACTAT GTTCGATAAA CTTTCCTCCA GTTTTTCAAC TAAAGCATTA AAGATAGCCG AACGCAGTGT CGGACTCCTA TCCAAAGGAT TTAACGAAGA AAGCAGCAGC CGTGTCGCCA AAATCGTCAT AGAAGAAACC AATGTAGGCG CAGTAGCCAT CACTGACAGG GAAAAACTGT TGGCTTTTAT TGGCATAGGT GCCGATCATC ATCTGCCTGG CACGCTGATT TCATCTAAGA TCACCTTAGA GGCGATTAAT CAAAATAAAG TCATGTTCGC CGATGGCGTT GAAATGCCTT ACTCATGTTC TATTTCAAGT AATTGTCGTT TAGGTTCGAG TCTGGTGATC CCACTGCGCA GTGATACCGA AGTCATTGGC ACCATTAAAC TCTACGAGCC GAAAAATAAA CTTTTTTTGA ATATTAACCG CACCTTAGGT GAAGGTATTG CCCGTCTGTT ATCAAACCAA ATTCTTTATG GCCGATTTGA GCAACAACAA AATCTGCTAA CTCAAGCCGA ATTGAAATTA CTGCAAGCGC AGGTTAATCC ACACTTTCTA TTCAATGCAC TTAACACCAT TAGCGCGATT ATCAAGCGCG ATCCCGATAT GTCTAAGCAA TTGCTGCAGC AGTTATCTCA ATTTTTACGG ATTAATTTAA AGCGAACGAC AGGCTTAGTG ACACTTGGGG ATGAGCTAGA TCACATCGCG TCCTATCTCA CCATTGAAAA AGCGCGTTTT ATTGATAAAT TACAAGTCAG TATCGCGATA CCTGAATCAC TCTACCACTG CAAAGTACCG GCCTTTACCC TGCAGCCGAT TATTGAGAAT GCCGTAAAGC ACGGCACTTC GCACATGATA GAGCAAGGGC AGATCAAAGT GACGGGCAAG CTTGAAAATC ATGTGTTGGA ATTAGAAGTC ACAGACAATG CCGGATTATA TCAGCCCGTT GAGGGCTCTG AAGGCCTAGG GATGAACTTA GTGCATAAAC GCATTCAAAA TATTTTTGGC GAACAATATG GTGTTACTGT GGAATGCGAA GCCGATGAAT TGACTCGTGT CACCATAAGA TTACCTATAG AAAACCCTGA GATATCCAAT ATGGACACCC GCACGTGA
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Protein sequence | MSLILLLTQQ MSLYLVIVYL VSKTPLFKLF AETSPRLPHK IFMYLIFSSF CIMATYFGEQ TSGAIANTRA MGAVLGGLLG GPVTGFLVGL TGGLHRYSMG GFTEIACAIS TTLEGLSAGM ISFYLRRAGK SELIYNPLLV CLVTFYAEMM QMSIILLVAR PFDDAWELVR QIAPPMLLVN SVGAALFMSM IRDQKTMFDK LSSSFSTKAL KIAERSVGLL SKGFNEESSS RVAKIVIEET NVGAVAITDR EKLLAFIGIG ADHHLPGTLI SSKITLEAIN QNKVMFADGV EMPYSCSISS NCRLGSSLVI PLRSDTEVIG TIKLYEPKNK LFLNINRTLG EGIARLLSNQ ILYGRFEQQQ NLLTQAELKL LQAQVNPHFL FNALNTISAI IKRDPDMSKQ LLQQLSQFLR INLKRTTGLV TLGDELDHIA SYLTIEKARF IDKLQVSIAI PESLYHCKVP AFTLQPIIEN AVKHGTSHMI EQGQIKVTGK LENHVLELEV TDNAGLYQPV EGSEGLGMNL VHKRIQNIFG EQYGVTVECE ADELTRVTIR LPIENPEISN MDTRT
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