Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1622 |
Symbol | |
ID | 4843104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 1894149 |
End bp | 1895342 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640118841 |
Product | methionine gamma-lyase |
Protein accession | YP_001050005 |
Protein GI | 126173856 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.858824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGATG AGTCAGGCAA GATGTGGAAA GCGGCAACAC AGGTTATTCA TGGCGGCCAT GAGCGTGAGG CCTTTGGCGC CTTAGTAACG CCGCTATATC AAAGTGCGAC TTTTGTGTTT GAGTCTGCAC AGCAAGGCGG TGAGCGATTT GCGGGTAATG AGCCGGGGTA TATTTACACG CGCTTAGGGA ATCCGACAAC CGCCGAGCTT GAACGTAAAA TGGTGATTTT AGAAGGGGCA GAGGCAGCCG CTGCAACCGC ATCTGGTATG GGCGCAGTAT CCGCCGCATT ACTGGCTAAC TTGCAGATGG GCGATCACTT AGTGGCATCC AATGCCGTAT ACGGTTGTAC TTATGCGCTA ATGATGACTC AGTTCGCTCG CTTTGGGATT GAAGTGTCCC TAGTGGACTT TTCATCGGTA GTAGAAATAG AAGCGGCGAT TAAATCCAAT ACTAAGGTCA TTTTCTGTGA AACTCCAGTG AATCCCCATT TGCAGGTGTT TGATTTGGCG GCAATTGCGA CTATTGCCAA ACGTCATCAG TTGGTCAGTA TTGTCGATAA CACTTTTATG ACCCCATTAC TGCAGAGACC GCTGGATTTT GGTATCGATT TGGTGATCCA CAGTGCGACT AAATATCTGA ATGGTCATGG CGATGTGATT GCGGGGATAG TGTGTGGCAG CGAAGAACAG CTCCATAAAG TGAAGTATGA AATCTTAAAA GATATTGGCG CTGTGATATC GCCACATGAT GCTTGGCTGA TCTTGCGCGG CCTTAAAACC TTAGATGTAC GTTTACAGCG CCATTGCGAT AGTGCCCAGC GAGTGGCCGA GTTTTTGGCC GAACATCCCA GTATTAACCG CGTGTATTAT CCCGGACTTG CCTCTCACCC AGGGCATAAA TTTATTGGTC AGCAGATGAA ACGTGCCGGC GGGGTGATCG CGTTTGAACT GGCGGCAAAT TTAGAAGAGG CTATGGCCTT TGTGGGGCAT TTAAGCTTGT TCTCTATTGC GGTGAGCCTA GGCGATGCAG AATCCCTCAT TCAACATCCA GCGTCGATGA CGCACTCTCC CTATACGCCA GAGGCGAGAG CGGCGGCTGG CATTGGTGAT AATCTGCTGC GAATTTCCAT TGGCTTAGAA GATTGTGACG ACATTATCGC CGACCTGAAT CAAGCACTCG CGCGTTTGGC ATAA
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Protein sequence | MQDESGKMWK AATQVIHGGH EREAFGALVT PLYQSATFVF ESAQQGGERF AGNEPGYIYT RLGNPTTAEL ERKMVILEGA EAAAATASGM GAVSAALLAN LQMGDHLVAS NAVYGCTYAL MMTQFARFGI EVSLVDFSSV VEIEAAIKSN TKVIFCETPV NPHLQVFDLA AIATIAKRHQ LVSIVDNTFM TPLLQRPLDF GIDLVIHSAT KYLNGHGDVI AGIVCGSEEQ LHKVKYEILK DIGAVISPHD AWLILRGLKT LDVRLQRHCD SAQRVAEFLA EHPSINRVYY PGLASHPGHK FIGQQMKRAG GVIAFELAAN LEEAMAFVGH LSLFSIAVSL GDAESLIQHP ASMTHSPYTP EARAAAGIGD NLLRISIGLE DCDDIIADLN QALARLA
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