Gene Sbal_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_1517 
Symbol 
ID4841908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp1762814 
End bp1766017 
Gene Length3204 bp 
Protein Length1067 aa 
Translation table11 
GC content47% 
IMG OID640118735 
Producttranscriptional regulator, CadC 
Protein accessionYP_001049902 
Protein GI126173753 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATCG TTATGAGTGA CAGCACATTT TTCTTTGGTG AATGGCAAAT CAATCCCAGC 
GCCAATAGTC TGCTCCTTGG CAAACAAGTC AAACAACTTG AGCCCAAGGC GATGGATGTG
CTGCTGTTTC TCTGTCAACG GGCGGGCGAA GTCGTCAGCA GTGATGAAAT AGTCAGCCAC
TGCTGGCCGG GTGTTGATAC TGGCGACAAT CCACTACACA AAATTATCAA TCAGTTACGT
AGAGCATTAG ACGATAGCGC CACCGATCCC ATCTATATAG AAACCATACG CAAACGCGGC
TATCGCACCT TAGCCGAAGT GCGTTTTCCT ATCGGCCACG AAGCCACCGC CTGCCCGCAA
AGTTGGCAAG GCGGCTCGCC CTTTCCGGGT CTGCAAGCCT ATAGCGCTAA CTATGCCGAG
GTGTTTTTTG GTCGCAGTGA ACAAATCAGC ACTTTGCTTA ACCGTATCAG CCAGCAAATC
ATCTATGGTC GTGCCTTCTG TCTGGTTTTA GGCCCAAGTG GCAGCGGTAA ATCCTCCCTG
ATAAATGCCG GTGTTGTGCC CAATTTAATG AAGGGCGGCG GCTATAACGG CATTGGTGTC
GCGTCATTCA GCAGCTTAGA TTTTGCCGAT GTGAGTAAAG GGCAACTGTT AACCGATCTT
GCCAGCGCTA TGCTCGACTG GGAAATCAAC GACACGCCAG TATTCGAAGG CATGAGTGCC
GATACTCTGG CGGTTCAACT TGTCGAAGAT ATCCAAGGCG TAATCAACCA GTGCACCCAA
GCTCTCAATG TTCAGCCCTT TACTCAGCCG TTTTTTGCCT TGTTTATCGA CCGATTAGAA
GTGTTGCTCT CATCACCGCT ATTTAGCGAC ACCGAGCGCA CGGTATTTGT TGAACTGCTG
GAACAACTCG CCACCTCTAA GGCCGTGATT ATTATCAGTG CCTGTCGCAA CGATTTTTAT
CCTTTACTTG TGGGCTACCC AAGCTTAATG GCCGGCAAAT CTCGCGGCGC CCACTTTGAC
TTAGCGCCGC CGACACGCAC TGAACTGTTG CAAATGATCC GCCTGCCTGC GGTGGCCGCC
AACTTAAGCT GGGAAGTTGA CAGCGAAACC GCGATGCCGC TCGATGAAAT GCTCTGCAGC
GACGCCGCCA GTAACCCAGA TGCACTGCCC ATGTTGCAAT ACACGCTGCA AGCCTTGTAT
TTACAGCGCA GCGCCGACGA TAAGTTATTA GTCTCGGTTT ATCATGCCCT TGGCGGTATT
GAAGGGGCGA TTGGTAAAAA TGCCGAGCAA GCGATTTCCC ATTTAAGCGA TGCCGAAAAA
GCCAGTCTGC CACGGATTTT ATCCCTGCTA GTCACCTTGC GCGAAGATGA AAAGTCCATC
ACCAGCCGCA CCGCCCGCTG GTCGCAGCTG CAAAGCACCG CCGAAACCGC CCTAGTGCAA
GCCATGGTCG ATAGCCGCTT ATTCGTGTCG CATCTGCAAA ATGGTGAACC CTGTTTTAGC
ATCGCCCACG AAGCCCTGCT GCGCCGCTGG CCACGGGCGA CGGCGTGGAT TAGCGAACAT
AGCGACAGTT TGAGCATTAA GAGTCGCCTA CAGCATCTTT CAACACGCTG GCTCAGCGAA
GCCAAACACA GCGCCTATCT ACTCGCTGAA GGTAAACCTT TAAAAGAAGC CCAAAGCCTC
AGCCAAAATC CGTTATTCGA TTTAGACGAT CCCGAAACCG CCTTTATCAC AGCCTCCACC
AAACGCGCCA ATATGCTGCG CTGGACGAGG GGCTTAACCG TCACCCTATT ATGCGCCCTC
ACCCTCACTT CCATTATCAT GAGTGTGCGC AGCATAGAAG CTGAAAAACT CGCCCTGCAA
AAACGCCTCG CCGCCGAAGA TTTGCTCGGT TTCATGGTGG GCGACTTCGC CGACAAGATG
CGCGGCATCG GCCGTATGGA CTTACTCGAT GGGATCAGTA ATAAAGCACT GGAATATTTC
AGTGATTTTT CCAATAAAGA GGATGATGCA CACTTAAGCT TCGACGCCCG CTTCCAACAC
GGCCAAACCT TAGAGGCCAT GGGCGAAGTG GCATATTCGC GCAATAAAAT TGATGAAGCT
CGCAGCGCAT TACTCGCAGC GCAAGAAAAA ATGCTGCCAC TATTGAGTGT ACAGCCGGAA
AACTTAGCCC TACTAAAAAC CTTAGGTGCC AATTCCTTTT GGTTAGGACA GCTTAAGTAT
GATGTGAGTG ATTGGGCGGC AACGCGCCCA TTATTCGAGC AATATTTAAA ATACAGCCAA
ACCATGTATA CCCTTGCGCC CGAAGATAAA GATGCGCTAA TGGAGCTGTC CTATGCCCAT
AATACTTTGG GTTCTGTATC TATGAAGCAG CAGGAATTTG CAAAAGCACA GCAAGATTTT
GAGGAATCAT TAAGACTTAA ATTGCTCGCC TTGGCAAAAG CACCTGAGGA TAGTCAGCTG
ATTGCGGATG TGGCTAATGC TCGATCTTGG TTAGCGAGTG CGGCAGTGTC TTTGGGAGAC
ATAAACACAG CAATATCAAT CCATAAAGAA CTGCAAAAAG AGTTAGAACT AGGTAATCAT
ATAAAAAGTC CTTATTTGCT AGAAAAACTA AGCGGAAGCT ACCAAACTCT CGCAGATTTG
TTTAGTTATA CTGAACATAA AGATGAAGCT CTTAATCAAG CCAAGTTAAA CCTATCAACT
GTTGAAGAAA TACTAAGGCA AGATCCCAAA AATGACATAT GGAAAACATT GAGATATTAC
TCTATTTTTC AAGTAATCAG ATTAAGTAAC TCTTCAACAG AGAAAAATCC AGAGAACAAA
ACTAGCGCAC TAGAAGCTTC TATGTCTGCT GATAATAGTC TTAATGAAAT TCAAAAAAAG
TCTGAAATAT GGGCAAACTT TTACTTATCA TCATCCTATT TCCTCATGAA CTCAGGTAAC
TATAAAGATG CCAAAACCCA TGCAGAAAAA GCATACAAAT CGTATCTAAC GTTATCAAAA
GATTTTTCAC AAAATATGAC TTTCGAACTC AACTTAGCAG AAAGTGAGTT ACTAATTTCC
GAGAGCAATG AATACTCTTT TGAAATAAAT AATTCTTTTT GCCGCAAAGC AAATGAACGT
ATAAAAAAAC TAATGAAATT AAGTAGAGAA CCAAAGTATA AATTCTTATT TGAGCGTTCT
ATTAATTGTA TACATGTACA ATGA
 
Protein sequence
MDIVMSDSTF FFGEWQINPS ANSLLLGKQV KQLEPKAMDV LLFLCQRAGE VVSSDEIVSH 
CWPGVDTGDN PLHKIINQLR RALDDSATDP IYIETIRKRG YRTLAEVRFP IGHEATACPQ
SWQGGSPFPG LQAYSANYAE VFFGRSEQIS TLLNRISQQI IYGRAFCLVL GPSGSGKSSL
INAGVVPNLM KGGGYNGIGV ASFSSLDFAD VSKGQLLTDL ASAMLDWEIN DTPVFEGMSA
DTLAVQLVED IQGVINQCTQ ALNVQPFTQP FFALFIDRLE VLLSSPLFSD TERTVFVELL
EQLATSKAVI IISACRNDFY PLLVGYPSLM AGKSRGAHFD LAPPTRTELL QMIRLPAVAA
NLSWEVDSET AMPLDEMLCS DAASNPDALP MLQYTLQALY LQRSADDKLL VSVYHALGGI
EGAIGKNAEQ AISHLSDAEK ASLPRILSLL VTLREDEKSI TSRTARWSQL QSTAETALVQ
AMVDSRLFVS HLQNGEPCFS IAHEALLRRW PRATAWISEH SDSLSIKSRL QHLSTRWLSE
AKHSAYLLAE GKPLKEAQSL SQNPLFDLDD PETAFITAST KRANMLRWTR GLTVTLLCAL
TLTSIIMSVR SIEAEKLALQ KRLAAEDLLG FMVGDFADKM RGIGRMDLLD GISNKALEYF
SDFSNKEDDA HLSFDARFQH GQTLEAMGEV AYSRNKIDEA RSALLAAQEK MLPLLSVQPE
NLALLKTLGA NSFWLGQLKY DVSDWAATRP LFEQYLKYSQ TMYTLAPEDK DALMELSYAH
NTLGSVSMKQ QEFAKAQQDF EESLRLKLLA LAKAPEDSQL IADVANARSW LASAAVSLGD
INTAISIHKE LQKELELGNH IKSPYLLEKL SGSYQTLADL FSYTEHKDEA LNQAKLNLST
VEEILRQDPK NDIWKTLRYY SIFQVIRLSN SSTEKNPENK TSALEASMSA DNSLNEIQKK
SEIWANFYLS SSYFLMNSGN YKDAKTHAEK AYKSYLTLSK DFSQNMTFEL NLAESELLIS
ESNEYSFEIN NSFCRKANER IKKLMKLSRE PKYKFLFERS INCIHVQ