| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1504 |
|---|
| Symbol | |
|---|
| ID | 4842867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 1748693 |
|---|
| End bp | 1749193 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640118724 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_001049891 |
|---|
| Protein GI | 126173742 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02044] Cu(I)-responsive transcriptional regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAG GCGAAGTGGC GAAACAAACG GGCTTGAGCG TTAAGAGTAT CCGTTATTAC
CATGATATTG GCTTAGTGTG CGGCGAGCGC AATGAGGCGG GTTATCGGGT TTACCGCCAT
CAAGATATTG AAGCGCTTAA GTTTGTGCAT CAATGTCGCG ACTTAGGTTT TAGCCTAGAA
GATTGCAAAT CCTTGCTTGG CCTTAAGGGC AATGAGAGCC GTAATGCCGA AGACGTCAAA
CAACTTACCC GTACTCACCT TGCCTATGTC GAAGAGCAAA TCAATAAGTT GCAACAGCTT
AGGGCGCAAT TACAACACAT GGTGACCCAA TGCCAAGGCG GCGATCAGCC CCACTGCGCG
ATTATTGATA GCCTAAGCCA TGAGGACAAC GAGAGTAACG ATACTGACGA TGACAAATCC
CAAAAAGACC AAAGCCTGCA CGATGCAGGC TCTGAGTGTT GTTGTAAAGC CAGTCGCACT
AGCAACGGCC AAGAGTCATA A
|
|---|
| Protein sequence | MKIGEVAKQT GLSVKSIRYY HDIGLVCGER NEAGYRVYRH QDIEALKFVH QCRDLGFSLE
DCKSLLGLKG NESRNAEDVK QLTRTHLAYV EEQINKLQQL RAQLQHMVTQ CQGGDQPHCA
IIDSLSHEDN ESNDTDDDKS QKDQSLHDAG SECCCKASRT SNGQES
|
|---|
| |