| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1481 |
|---|
| Symbol | |
|---|
| ID | 4841655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 1722937 |
|---|
| End bp | 1723419 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640118701 |
|---|
| Product | ferredoxin-type protein NapF |
|---|
| Protein accession | YP_001049868 |
|---|
| Protein GI | 126173719 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain |
|---|
| TIGRFAM ID | [TIGR00402] ferredoxin-type protein NapF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000195514 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAA GTATTAATCA CAGTCGTCGC AACCTCTTTC GCCGCCGTAA AGATAATGCC
TTGAGGCCCC CTTGGGTGCG TGATGATATC GAGTTCACCG ATGTGTGCAC GCGCTGTTCA
GCCTGTGTTG AGGTGTGTGA AACCCAGATC ATCATCAAAG GCGATGGTGG ATTTCCTGAA
GTGTCCTTTA AAGACAATGA GTGCACATTT TGTATGCTTT GCGCTAAGGC TTGCCCTGAG
CATATCTTCG ATTTAGCCCA AACACCTTGG TCGTATCAAG CCCATATTCA ACAGAGCTGT
TTAACCTTTC AAGGGATCTG GTGCCAAAGT TGTAAGGATG CCTGTGAACC AAGAGCCATC
AGTTTTGTGT TCAATATTGG CCAAGCTCCA CGTCCGCAAA TAGACCTTGA ACTTTGTACC
GGATGCGGCG CCTGTGTGGC TCCCTGCCCT AGCAAGGCCA TTGAAATAAC CCGACCGACT
TAA
|
|---|
| Protein sequence | MTQSINHSRR NLFRRRKDNA LRPPWVRDDI EFTDVCTRCS ACVEVCETQI IIKGDGGFPE
VSFKDNECTF CMLCAKACPE HIFDLAQTPW SYQAHIQQSC LTFQGIWCQS CKDACEPRAI
SFVFNIGQAP RPQIDLELCT GCGACVAPCP SKAIEITRPT
|
|---|
| |