| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1463 |
|---|
| Symbol | lpxB |
|---|
| ID | 4842906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 1695967 |
|---|
| End bp | 1697163 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640118683 |
|---|
| Product | lipid-A-disaccharide synthase |
|---|
| Protein accession | YP_001049850 |
|---|
| Protein GI | 126173701 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0763] Lipid A disaccharide synthetase |
|---|
| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000311571 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACATG ATTGGTTTAT GAGCAATAAA ACTCCATTAG TGTTTGCCAT GGTTGCCGGA
GAACTCTCGG GCGATATTTT AGGCGCAGGT TTAATGGCGG CGCTGCAAAA GAAGCACCCC
GATGCGCGCT TTGTCGGTAT CGGTGGCCCC CGTATGGAAG CCCTCGGCTT CAGATCCCTG
TTTGCGATGG AAGAGCTCGC CGTGATGGGG ATTGTAGAAG TGCTATCCCG TTTGCCTCGT
TTATTAACAG TACGTGCCTC CCTGATTAAA GAGATTACCG CGCTTAAGCC CGATTGTTTT
ATTGGTATCG ATGCACCGGA TTTTAATATT GGCCTCGAGC TTAAACTCAA AGCGCGTGGC
ATTAAGACGG TCCATTATGT GAGCCCGTCT GTGTGGGCGT GGCGTCCAAA ACGGATATTC
AAAATCGCCA AAGCCACTCA TATGGTGTTG TCGTTGTTGC CTTTTGAGAA AGCCTTTTAC
GATCAGCATC AGGTGCCTTG TACCTTTGTC GGTCATACCT TGGCCGACGA TATTCCCATG
CAAAGCGATA AGGCGGCTGC CCGTGCCTTG CTCGGACTAG ATGCTGATGC TGAATACTTA
GCGATCCTGC CCGGTTCCCG CGGCGGTGAG TTAAAGCAAC TGGCCGAGCC GTTTGTGAAA
GCAGCTTTAT TGATTAGACA AAATTCCCCA GACATACGTT TTGTGACGCC GCTGGTGAAT
CAAAAACGTC GTGACCAATT TGAGCAAGCG CTGAAGGATT TTGCGCCAGA TCTTGAAATC
CACATGATTG AAGGTCAGTC GCGTGAAGTG ATGACGGCAG CCGATGGGAT TTTATTGGCC
TCTGGTACAG CGACGTTAGA AGCCATGCTG GTCAAGCGTC CTATGGTGGT GGCTTATCGC
GTGAGCCCGA TAACCTATCG CATTGCTAAG CGCATGATGC AGGTGGAGCG TTTCTCGTTA
CCGAATTTGC TTGCAGGAAA AGATCTCGTC CCAGAACTCA TTCAAGAAGA TTGCACCCCA
GAGAAAATTG CGGCGGCAGT CACCCTTGAG CTCAATCGCG ATTTTGCGCC GCTTAAAGCC
GAGTTTGAAG CTCTGCACCA AGTATTACGC CGTGATGCGA GTTTAAAAGC CGCCGAGGCG
GTAATGGCGC TGGTTGAGCC TAAACACACT CATGCTAAAT TGCAGGAGGC TCATTAG
|
|---|
| Protein sequence | MRHDWFMSNK TPLVFAMVAG ELSGDILGAG LMAALQKKHP DARFVGIGGP RMEALGFRSL
FAMEELAVMG IVEVLSRLPR LLTVRASLIK EITALKPDCF IGIDAPDFNI GLELKLKARG
IKTVHYVSPS VWAWRPKRIF KIAKATHMVL SLLPFEKAFY DQHQVPCTFV GHTLADDIPM
QSDKAAARAL LGLDADAEYL AILPGSRGGE LKQLAEPFVK AALLIRQNSP DIRFVTPLVN
QKRRDQFEQA LKDFAPDLEI HMIEGQSREV MTAADGILLA SGTATLEAML VKRPMVVAYR
VSPITYRIAK RMMQVERFSL PNLLAGKDLV PELIQEDCTP EKIAAAVTLE LNRDFAPLKA
EFEALHQVLR RDASLKAAEA VMALVEPKHT HAKLQEAH
|
|---|
| |