Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1381 |
Symbol | |
ID | 4842044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 1586468 |
End bp | 1587235 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640118601 |
Product | integrase catalytic subunit |
Protein accession | YP_001049768 |
Protein GI | 126173619 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00319842 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGCC GAAGCGCTGA GCTATCGGTC ATCAAAGACT GGGTCCAATA TTGGCGTAAC TATATGCCAC GATTGGGGAC GCGTAAGCTC TATACTTTGA TACAGCCTAA GCTGGTTGAA CATGATATCA AACTCGGGCG AGACGGGTTC TTTACCTACT TGAGAAGTGA AGGCTTGCTA GTTAAGCCCA AGAGAAGCTT CACAAAAACG ACATTCAGCA AGCATTGGAT GAAGAAGCAT CCCAACCTGC TGAAGGAAGA GGGACTACAC GATGTCGAGC ATGTACTGGT CAGCGATATT ACCTATCTCG AATCAGACCA AGGCGTGCAC TATTTGTCAC TGGTGACCGA TGCCGCGTCA CGTAAGATAG TCGGTCATCA CTTGAGTTCG GACATGAAAG CAGAAAGCGT AGTGAAAGCA CTGAAAATGG CGGTCAAAGA TAAGCGCTAT AGCGCTAATG CGGTCCATCA CTCAGACCGA GGTTCGCAAT ACTGCTCAGC TGTTTATCAA GATAAACTGC AGGCCAACCA TATTCAGCCG TCGATGACAG ACGGTTATGA TTGCTATCAA AATACGTTAG CAGAACGAGT AAACGGGATC CTGAAGCAGG AGTTTTTACT CTACCGATGT AAAACGCTGG AAGAGCTGAA GAGACTTGTT AGAGAATCGA TAGCGATATA CAACGAAATG AGACCGCATC TGAGTTTGGA TATGGAAACA CCCAATCAGG TGCATAATAG AAAAGGCCAG CTACTGGAGC TGGCCTAG
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Protein sequence | MASRSAELSV IKDWVQYWRN YMPRLGTRKL YTLIQPKLVE HDIKLGRDGF FTYLRSEGLL VKPKRSFTKT TFSKHWMKKH PNLLKEEGLH DVEHVLVSDI TYLESDQGVH YLSLVTDAAS RKIVGHHLSS DMKAESVVKA LKMAVKDKRY SANAVHHSDR GSQYCSAVYQ DKLQANHIQP SMTDGYDCYQ NTLAERVNGI LKQEFLLYRC KTLEELKRLV RESIAIYNEM RPHLSLDMET PNQVHNRKGQ LLELA
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