Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1376 |
Symbol | rdgC |
ID | 4842039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 1580736 |
End bp | 1581650 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640118596 |
Product | recombination associated protein |
Protein accession | YP_001049763 |
Protein GI | 126173614 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2974] DNA recombination-dependent growth factor C |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0087416 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGGTTTA AAAATCTTAC TCTTTATCGT TTCAATAAAC CTTTTGCCGT CGAAACCGAA GCGCTAGAAA CTGCGTTGGC CGATTTCACT TTCTCTCCGT GCTCAAGCCA AGATGTCAGT AAATTTGGTT TCTCTAATGC TTTAGGCAAG AAAGGCAGCT CCTTGGTACA CAGTGCCGAC AATCGCCATC TGATCTGTGT AACTAAAGAA GAGAAAATCC TCCCAGGCCA AGTCATCAAA GAAGCCTTAG AAGAAAAAGT CGCCCTCATT GAAGATGAAG AAAATCGTAA GATGGCGAAA AAAGAAAAAG ATGCGCTAAA AGATGAAATC ATTACTAGCC TACTGCCACG CGCTTTTTCA CGCCGCAGCC AAACCCATGC CTTGATTTTG CCAGAGCTGG AAATGATCCT TGTCGACAGT TCAAGTGCCA CTAAAGCCGA AGAGCTGTTA GCGTTATTAC GTAAAGCGCT CGGTAGTTTG CCGGTGATCC CATTGAGCTT TAAAGCGCCA GTCGAATCCA ATTTAACCGA ATGGTTAAAA CTTGGCAGCG CGCCATTACC TTTTGAAATG CAAGATGAAG CTGAACTTAA ATCCGAAGCG GATGAAGGCG GCATTGTACG TTTCAAGCAA CAGGATTTAA AAGAAGACGA AGTATTAGCT CACCTCGCAA CAGGCAAGCA AGTCCACAAG TTAGCACTGC ATTTCGGCCA ATCGATTGCA CTATTATTGC AATCGGATGC CAGCGTTAAA CGCCTTAAAT TCTCTGAAGA ATTTAGAGCG GGTAACGATG AAGTGGGCAC AGACGACCCT ATGGCACGTT TAGATGCAGA CTTTGCCTTA ATGGGCAGCG AGTTAGTCGC CTTGATGCAT GCGCTCGTGG CAGCACTAGG TGGACTCGAA GAAGCACAAG TTTAA
|
Protein sequence | MWFKNLTLYR FNKPFAVETE ALETALADFT FSPCSSQDVS KFGFSNALGK KGSSLVHSAD NRHLICVTKE EKILPGQVIK EALEEKVALI EDEENRKMAK KEKDALKDEI ITSLLPRAFS RRSQTHALIL PELEMILVDS SSATKAEELL ALLRKALGSL PVIPLSFKAP VESNLTEWLK LGSAPLPFEM QDEAELKSEA DEGGIVRFKQ QDLKEDEVLA HLATGKQVHK LALHFGQSIA LLLQSDASVK RLKFSEEFRA GNDEVGTDDP MARLDADFAL MGSELVALMH ALVAALGGLE EAQV
|
| |