| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1375 |
|---|
| Symbol | |
|---|
| ID | 4842038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 1578742 |
|---|
| End bp | 1580559 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640118595 |
|---|
| Product | peptidase M61 domain-containing protein |
|---|
| Protein accession | YP_001049762 |
|---|
| Protein GI | 126173613 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0830083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACCCA ACAGATTATC AATCTTGATA TTAAGTGTAT TATTTTCGGG CCAAGTATTG
GCCGATGTGA AATATCAAAT CGACCTCGTT AAACCCGAGC ATCATATCGC CCAAGTGAGT
GTGACTTTTC CTGAAGTGAA GACCACAGAT TTTAAGGTCA ATTTGCCAGT GTGGCGCACG
GGTAAATATC AAGTATTGCC TTTAGCCGAT GGCGTGCGTT TATTTAGCGC TAAAGACAAT
CAAGGCCATG AACTCCCATG GAAACGTACG GCGAGCGGTG AATGGCAAGT CGCGCTCACG
CAGCCAACTA GCGTAACGGT TAGTTATCAG TTGTATGCCA ATGAATTAGG CCAAAGGGTT
CGCCATATTG ATGCGAGCCA CGCGTATTTA GATGCCAGCG GCGTGTTCAT GTATAGCCCG
CAATTTCGCT CTGAGCCTGT ATCGGTTCAA TTGAACGTTC CTGAAACGTG GCAAAGTTAC
TCGGGTATGG CTTCAGGCAC GCCAGCGCAT TCTTTTATCG CGCAAAATTA CGATGTGTTA
ATTGATTCCC CTATCGAAAC CGGTGTGAGC ACCCATAAGC AATTCAGTGC TAATGGCAAA
AACTATGAGT TGGTATTTTG GGGTGATGGT AACTATGACG CCGATAAAGT CGTTAAGGAT
TTAACGGCAT TAAGTGGTCA AGCAAAGGCG ATTTGGGATG ATTATCCTTT TGATCGTTAT
GTGTATATGG TGCATGCCAC CAGCGGCGCC AGTGGCGCGA CAGAACATGT AAATTCTACG
GTTATCCAAC TGCCGCGTTT TAGTTTCCGT GAGCGCAAGG ATTACCTACG CTTTATTAGC
ACAGCATCCC ATGAGTTTAT CCATACCTGG AACGTAAAGG CCTATCGTCC TGCGGGACTT
GTGCCCTATG ATTATCAGCA TGAAAACATG ACGGAATTAC TGTGGATGGC CGAAGGCTCT
ACCAGTTATT TCCAAGGTCA GTTACTGCTG CGTGCTGGGG TGATGACGCC TAAAGAGTTC
CTCGAAGACT TAGCTAAACG CGTTGAGAAA AACCAACTCA ACCCTGGGCG TGAAACTCAA
TCTGTTGCCG AGGCGAGTGC AGGAGAGTGG AGCAGCACGG GCGGTGATTA TGCGATTAAT
CACAGTGTGA ATATCTACTC TGAGGGTTAC TTAACCTCCT TAGCGTTAGA TTTCTCGCTG
CTGCAAGATA CGAAACTCAT GCATTCATAC CGCGATGTGC ATCGCCGTTT ATATCAAGAT
CACCGTGTGC CAAAGGGCTA TGGGGTTAGT GATGTGCAGC ATATCCTTAA GGATTTATCC
GGCAAAGATT ATGCGCCTTG GTGGCAGGCA AACGTGAATA GCCCGATGAG CTTAGATTTC
CCTGCACTGT TATCGCAGGC TGGGTTAGCA ATGTCCTATG GCAAAGATTC AAAAGTCGAG
GCATTTGCCG GCATGACGTT AAGCAGCGCC CATGGATCTT TAGTGTTGGA TCAAGTACTG
CGTAATGGCC CAGCGTGGCG AGCGGGTATC GTCGCGGGGG ATGAAGTATT AGCGATTAAT
GGTCTTAAGG TCACAGCTGT GGGGTTTGAT AAGCGCATTA AAGACTTTAA GACTGGCGAT
AGCATTGAAG TGACACTATT CAGCAATGAT AAAATCAAGC AAGTTAAGCT CACCCTTGGT
GAACAGCAAA GCGGTAAGTT AGTGCTTAAG GGCGATGCGA AAGCGACTAA ACAGCAAAAA
GCCTTCTTCA AGGCTTGGTT AGGCATTGAT TGGCCGTTCG ATAATAAAGG CGAGCTAGTG
TCTAAAGCCA ATGACTAA
|
|---|
| Protein sequence | MKPNRLSILI LSVLFSGQVL ADVKYQIDLV KPEHHIAQVS VTFPEVKTTD FKVNLPVWRT
GKYQVLPLAD GVRLFSAKDN QGHELPWKRT ASGEWQVALT QPTSVTVSYQ LYANELGQRV
RHIDASHAYL DASGVFMYSP QFRSEPVSVQ LNVPETWQSY SGMASGTPAH SFIAQNYDVL
IDSPIETGVS THKQFSANGK NYELVFWGDG NYDADKVVKD LTALSGQAKA IWDDYPFDRY
VYMVHATSGA SGATEHVNST VIQLPRFSFR ERKDYLRFIS TASHEFIHTW NVKAYRPAGL
VPYDYQHENM TELLWMAEGS TSYFQGQLLL RAGVMTPKEF LEDLAKRVEK NQLNPGRETQ
SVAEASAGEW SSTGGDYAIN HSVNIYSEGY LTSLALDFSL LQDTKLMHSY RDVHRRLYQD
HRVPKGYGVS DVQHILKDLS GKDYAPWWQA NVNSPMSLDF PALLSQAGLA MSYGKDSKVE
AFAGMTLSSA HGSLVLDQVL RNGPAWRAGI VAGDEVLAIN GLKVTAVGFD KRIKDFKTGD
SIEVTLFSND KIKQVKLTLG EQQSGKLVLK GDAKATKQQK AFFKAWLGID WPFDNKGELV
SKAND
|
|---|
| |