Gene Sbal_1374 details

Gene Information

• Locus tag: Sbal_1374
• ID: 4842037
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: -
• Start bp: 1576445
• End bp: 1578607
• Gene Length: 2163 bp
• Protein Length: 720 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640118594
• Product: TPR repeat-containing protein
• Protein accession: YP_001049761
• Protein GI: 126173612

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAAAC TCACGGTTAT TTTATTTACT TTGTTGCTGT CACTACCTTT TAGCGTTCAA 
AGCCGAGATC TCGAAGCTGA TGAGGTGGAG TTAAGAGAAT CGCCACAGCA AATGTATGAT 
GTACTCAACA AATCCATTTC CTTCCCCCTT GCGTTCCAAA ACCGTGACCA ATTTGAGCGT 
GCAGCCCAAG AACAAGGCTA CAGCCCAATC GAATTTGAAC AGATTTTGTA TCTGCTGACT 
CGGCTGAATA TGGAGCCGAA CGTGAAAACC AAGGTCGGTT TTCAAGACGC AAAAAGCTTG 
ATTGAACTCT TATCCACTGC GGCGCAATCG CCCTACGAAC TGGCTATGGT CGCCATGTTG 
AATGGTCGTT ACCTTGGCCG TACCGAACAG AAATATCAAG AAGCGATTGG CCTATATAAC 
GAAGCGCTCA CTCGCATCAA CGACAGTTAT GACATCGAAG CATTGATTCT TAAGCACAAT 
ATTCATGAGC ACTTAGGCGG CTTACATTTA TTGATCCGCC AAGAAGTACC GGCGCTGATG 
CACTTCCATA CATACCGCGA CATTGCCTAT AAGCTCAGAA ACGATTACTT AATCGCGGCG 
GCTGAAGCAA GACTGGGGTT CTATTACAAT TTTAATCAGC AGCTCACCAA ATCATTGCAG 
CATTACAGTG AAGCAATTCG GATCTCCAAT CGCTCTAATT ACCCGGCGAT GAAAACCAAT 
CTGCAATTGC AACTTTCTAA GGTATATCGC GATTTAAAGC AGTGGGATGA AGCCCTTAAA 
AATGCCCACG AAGCCGCTGC TGGTTTTAAA AAAATGGGCA ATGACACCTA TCTTTCAAGC 
TGTATGACAG TAATCGCTAT GGTGTATGGC GAACAAGGGG ATTGGAATAA AGCGATTGAT 
TACTACCTTA ATGCCCAGCA ATTAGATGCC AAACGCGGTA ACTATATTGC CCAAGGCCTT 
AATTTCCACA ATCTTGGGCA AGCCTACTCA AATATTAATG ACAATGTTAA CGCCCTAAAA 
TATTTACTGA TGGCCAATCA AATATTCAAA GAAAAACAAA GCCATCACTA TCAGGTTTAT 
AACGAACTCT TAATTGGCGA AATCGCACAA ACCAACCAAG ATTGGCCGCT AATGATGACC 
CATGCCGACA TCGCATTGGC ACTGGCTATC GACTTAAAAC TCGTCAATGA ACAAAAAGCT 
GCGCTCACAC TGATTGCCTC GGCGTCGCAA AAATTAGGGG AATTATCCAA AACCATCGAT 
GCCCAAACTC GTATCATAGA GCTAGGCAAC ACCCTTGCAG AGAAAGAGAA AGACTCCCCA 
GTGTCAACCT CAGCCCTTGC GGAACAACAA CTCAAACTTG AGCTCAACAT GGTTCAGGGA 
AAACTTGCCG AGACAGTGAA GGAAAGCAAC AGCACCCACA CGCTACTGCT CATCAGTTGC 
CTCATTGCCG GACTCTTGCT GCTGGTGATT GCGTATATGT TGCATCATCG CCGCAAAATC 
TCGGCAATAA ACGCCGCATT AACTCAATTG AGCCTACAGG AACCCTTCAC CCATAACTTA 
GGCTATGCGG CGCTATTAGC GCACTTGGGC CATAATCAAC ATCAAGCGTC TACAACAGCT 
TTAGGGATTA TCGCCTTCCC CGCCCAGCTC ACGACCGACC TCGACTATGG CCAATATTTT 
AGTGATGCAG TAACGGCGCA ACTGGCCACT CATCTTACCG ATGCGCTCGC AGCACCTGTG 
TATGTGATAC GCCAAGGGGT ATTTGCAGTG CGTTTCACCC AAGCCGTTGA GCCAACGCAC 
GTGCTCAGCC AGATACGCCA GAAACTCGAC CAACAGCACA TCGTCCATCA TTTCCGTCTT 
GGTTTTGCCA ACTTGCCACT GTTAGCGAAA TCAGAAATCA AAATGGCCGC GAAATTAAAG 
TTCGAAACCG TGCAGATGGC GCTCGCCTGT GCCCGCAGTT TAGAGGGCAA TAACGATTAT 
TTTGTCGCCC TCAGAGCACT CGACTTTGTC CCTCTAAGCT TATTTGCCAA TCCGTTATTT 
TTACACCTTG AAAAAGGCAT TGAGCGCGGG TTAATCAGAT TAGATACCAA CGGAAATAAA 
GAGGATGTTC GCTGGCCTTG CTGGGAAAAC AACCAAGATA GGCAATTACT GGAAAATATT 
TGA 

 

Protein sequence

MQKLTVILFT LLLSLPFSVQ SRDLEADEVE LRESPQQMYD VLNKSISFPL AFQNRDQFER 
AAQEQGYSPI EFEQILYLLT RLNMEPNVKT KVGFQDAKSL IELLSTAAQS PYELAMVAML 
NGRYLGRTEQ KYQEAIGLYN EALTRINDSY DIEALILKHN IHEHLGGLHL LIRQEVPALM 
HFHTYRDIAY KLRNDYLIAA AEARLGFYYN FNQQLTKSLQ HYSEAIRISN RSNYPAMKTN 
LQLQLSKVYR DLKQWDEALK NAHEAAAGFK KMGNDTYLSS CMTVIAMVYG EQGDWNKAID 
YYLNAQQLDA KRGNYIAQGL NFHNLGQAYS NINDNVNALK YLLMANQIFK EKQSHHYQVY 
NELLIGEIAQ TNQDWPLMMT HADIALALAI DLKLVNEQKA ALTLIASASQ KLGELSKTID 
AQTRIIELGN TLAEKEKDSP VSTSALAEQQ LKLELNMVQG KLAETVKESN STHTLLLISC 
LIAGLLLLVI AYMLHHRRKI SAINAALTQL SLQEPFTHNL GYAALLAHLG HNQHQASTTA 
LGIIAFPAQL TTDLDYGQYF SDAVTAQLAT HLTDALAAPV YVIRQGVFAV RFTQAVEPTH 
VLSQIRQKLD QQHIVHHFRL GFANLPLLAK SEIKMAAKLK FETVQMALAC ARSLEGNNDY 
FVALRALDFV PLSLFANPLF LHLEKGIERG LIRLDTNGNK EDVRWPCWEN NQDRQLLENI