| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1358 |
|---|
| Symbol | |
|---|
| ID | 4845663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 1558596 |
|---|
| End bp | 1559477 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640118578 |
|---|
| Product | polyprenyl synthetase |
|---|
| Protein accession | YP_001049745 |
|---|
| Protein GI | 126173596 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00331153 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTAGTCA GTGCCATTCA AGAATATCAA CAACGGGTTG ATAATCAATT AAAACAGCGT
CTTAGTACGC TTGAACATAC CGCACCCCAA TTAAAAGCCG CCATGACTTA CGGCGCCTTA
TTAGGTGGTA AACGCATTCG ACCTTTCCTT GTATACAGTG TCGGACGCAT GTTTGGGGTC
GAGCTCGAAA AATTAGATGC TTGCGCCGCA GCCATTGAAT GTATCCATGC TTATTCATTG
ATCCACGACG ATTTACCCGC CATGGATGAT GATGAGCTGC GCCGTGGTCA GCCCACAGTG
CATATCGCTT TTGATGAAGC GACCGCCATT TTAGCTGGGG ATGCACTGCA GACCTTAGCC
TTTGAAATTG TCACCGAAGC GGTACCTGGG ATCAGCAGCG AGCAACATAT CGCTATGGTC
AGAGTATTAG CAAAAGCCTC AGGTTATCGT GGCATGTGTG GCGGCCAAGC GATAGACTTA
GCCTCAACCG ATAAACATAT TGATCTTAAA GCATTAACTC AGTTACATAA TATGAAAACG
GGCGCCCTTA TCAGTTGCGC CGTTGAGTTA GCATTAATCG CCGCAAACGC GCCAAAAGAT
CAGTATGCTG CTATGATGGA TTTTGCCCGT GCGGTCGGAC TCGCCTTCCA AGTACAAGAC
GATATCCTCG ACATCGTAGC CACCACCGAA GAACTCGGTA AGCCGCAAGG CTCTGATACT
GAATCGAATA AGAGTACGTT TCCACAACTA CTTGGACTAC AAGGTGCACA AGACACCGCC
AAACAACTGA TCCAAGAGGC ACTATCAGCG CTGGCTAAAT TGCCATACAA TAGCCAGTTA
ATTGCAGACT TCGCCCGCTA TATCATTGAG CGAAGAATAT AA
|
|---|
| Protein sequence | MLVSAIQEYQ QRVDNQLKQR LSTLEHTAPQ LKAAMTYGAL LGGKRIRPFL VYSVGRMFGV
ELEKLDACAA AIECIHAYSL IHDDLPAMDD DELRRGQPTV HIAFDEATAI LAGDALQTLA
FEIVTEAVPG ISSEQHIAMV RVLAKASGYR GMCGGQAIDL ASTDKHIDLK ALTQLHNMKT
GALISCAVEL ALIAANAPKD QYAAMMDFAR AVGLAFQVQD DILDIVATTE ELGKPQGSDT
ESNKSTFPQL LGLQGAQDTA KQLIQEALSA LAKLPYNSQL IADFARYIIE RRI
|
|---|
| |