Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1357 |
Symbol | |
ID | 4845662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 1556706 |
End bp | 1558574 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640118577 |
Product | 1-deoxy-D-xylulose-5-phosphate synthase |
Protein accession | YP_001049744 |
Protein GI | 126173595 |
COG category | [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000384826 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTGG ACATTTCTCA GTTTCCCGTG TTGGCACAGG CCAACACCCC CAATGAACTC CGCCAGCTTC CTCAGGCACT TTTACCACAA GTAGCCGACG AACTGCGCGA GTTCCTTCTT AAGTCTGTTG GCATATCCAG CGGACATTTT GCCTCTGGGC TCGGCACAGT GGAACTCACT GTTGCGCTGC ACTATGTCTA CAACACCCCT TTTGATCGGC TGATTTGGGA TGTGGGCCAT CAGGCTTATC CCCATAAAAT TCTCACGGGT CGTCGTGACA AGATGCACAC CATTAGACAA AAAGATGGCT TGCATCCTTT CCCATGGCGT GAAGAAAGTG AATACGACAC TTTCAGCGTT GGGCATTCAG GCACGTCTAT CAGCGCCGCA CTGGCGATGG CGATTGCCGC AGAAAAAGAG CAAGCGGGTC GTAAAGTCGT TGCCGTGATC GGCGATGGCG CTATGACAGG CGGCATGGTG TTTGAAGCCA TGAACCACGC TGGCGACTTG CACAATGACA TGCTCGTGGT GTTGAACGAC AACGAAATGT CGATCTCTGA AAATGTCGGC GCCCTCAATA ACCATTTAGC ACAACTGATG TCAGGCCGTT TCTACACTAC GCTGCGCGAA GGCGGCAAAA AAGTGTTGAA AGGCATGCCC GTCATCAAAG AAATGGCCAA GCGCACTGAG GAACACCTCA AAGGCATGGT CGTTCCTGGC ACCCTATTTG AAGAGTTAGG TTTCAACTAT ATCGGTCCTA TCGACGGCCA CGATGTTGAT GCTCTGGTCG AGACCATGCG TAATATGCGC AATCTTAAAG GTCCACAGGT GCTGCACATC ATGACGAAGA AAGGTCGTGG TTATGAACCT GCTGAAAAAG ATCCTATCGG TTGGCATGCG GTGCCTAAGT TTGACCCGTC GCTGTTTAAA AAGCCGACTA CCAAACCCGG TTTGCCGACC TTTTCTCAAG TCTTTGGTAA ATGGTTATGC GACATTGCCG AGCAAGATGA GAAAGTATTA GCGATTACGC CTGCGATGCG CGAAGGCTCT GGCATGGTGG AGTTTTCCCA GCGTTTCCCG AAACAATATT TCGATGCGGC GATTGCCGAG CAGCATGCCG TCACCCTATC AGCAGGTTTT GCCTGTGAAG GCTTTAAGCC TGTGGTGGCG ATTTACTCGA CCTTCCTGCA ACGCGCCTAC GATCAGCTAA TTCATGATGT GGCGCTGCAA AAATTGCCAG TATTGTTTGC TATTGACCGT GGCGGTATCG TTGGTGCCGA TGGTCCAACT CACCAAGGTG CATTCGATTT AAGCTTTATG CGTTGCATCC CCAACATGGT GATCATGGCG CCGTCGGACG AAAATGAATG TCGTCAAATG CTCTACACAG GCTATTGCTA TGATGCAGGC CCAAGTGCAG TGCGTTATCC AAGGGGCTGT GCCACGGGAG CAACGCAAGT CGAAGCGATG ACGGCATTAC CGATTGGTAA AGGCGTGATC AAACGTGTGG GTAAGCGCAT TGCCATACTC AACTTTGGCA CCTTGTTAGC GTCGGCGTTA ACCGCTGCCG AAAGCTTAGA TGCAACGGTT GTCGATATGC GCTTTGTGAA ACCACTTGAT GTTGATTTGG TCAAAGAGAT GGCGCAAACC CACGAAGTAC TCGTCACAGT GGAAGAAAAC GCCATTATGG GCGGCGCAGG TGCTGGCGTG CTTGAGCAGC TTCAAAAGCT GCGAATGCCT AAAGCCGTGC TTCAAATTGG TTTGCCAGAT GAATTCATCA AACATGGCTC GCCAGAGGAA GTTACCCATG ATTTGCAACT GGATGCCGAA GGTATACTGG CGCAAATCAA TGCTTATCTA GCACAATAA
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Protein sequence | MSLDISQFPV LAQANTPNEL RQLPQALLPQ VADELREFLL KSVGISSGHF ASGLGTVELT VALHYVYNTP FDRLIWDVGH QAYPHKILTG RRDKMHTIRQ KDGLHPFPWR EESEYDTFSV GHSGTSISAA LAMAIAAEKE QAGRKVVAVI GDGAMTGGMV FEAMNHAGDL HNDMLVVLND NEMSISENVG ALNNHLAQLM SGRFYTTLRE GGKKVLKGMP VIKEMAKRTE EHLKGMVVPG TLFEELGFNY IGPIDGHDVD ALVETMRNMR NLKGPQVLHI MTKKGRGYEP AEKDPIGWHA VPKFDPSLFK KPTTKPGLPT FSQVFGKWLC DIAEQDEKVL AITPAMREGS GMVEFSQRFP KQYFDAAIAE QHAVTLSAGF ACEGFKPVVA IYSTFLQRAY DQLIHDVALQ KLPVLFAIDR GGIVGADGPT HQGAFDLSFM RCIPNMVIMA PSDENECRQM LYTGYCYDAG PSAVRYPRGC ATGATQVEAM TALPIGKGVI KRVGKRIAIL NFGTLLASAL TAAESLDATV VDMRFVKPLD VDLVKEMAQT HEVLVTVEEN AIMGGAGAGV LEQLQKLRMP KAVLQIGLPD EFIKHGSPEE VTHDLQLDAE GILAQINAYL AQ
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