| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1316 |
|---|
| Symbol | |
|---|
| ID | 4842393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 1498349 |
|---|
| End bp | 1499998 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640118536 |
|---|
| Product | malate synthase |
|---|
| Protein accession | YP_001049703 |
|---|
| Protein GI | 126173554 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2225] Malate synthase |
|---|
| TIGRFAM ID | [TIGR01344] malate synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.304553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAAC ACACTTTGAG TGAACAGCAA TTGAATTCGA CACTGGGTAA AGCTACAGCA
AACGCCACCC TTAATATTGT GGGTCGTGAC ATTCCAGGCC AAGAAGTCAT CTTTACCGAA
GGGGCTGTCG CCTTACTCGA ATCCCTTTGT CGTGAATTTG CCGACGAAGT ACCTGCCTTA
CTCGCTAAAC GTAAAGATAA GCAAGCGCGT ATCGATAAAG GATCATTACC CGACTTTCTG
CCTGAAACCC GCGCTATCCG TGATGGTGCA TGGCAAATTC GTGGAATTCC CGATGACTTG
CTTGACCGCC GCGTGGAAAT CACAGGTCCC GTTGAACGTA AGATGGTGAT TAATGCACTC
AACGCCAATG CCAAAGTGTT TATGGCCGAT TTCGAAGATT CTTTAGCACC AAGCTGGGAA
AAAGTCGTCG AAGGTCAAAT CAATCTACGT GATGCCGTGC GTGGTGATAT TGAGTACACA
GCACCGGACA CGGGTAAGCA CTACAAATTA GGACCAAATC CCGCAGTGCT TATTTGCCGC
GTTCGTGGTC TGCACCTTAA AGAAAAACAC GTGCAGTTTA ACGGCAAAGC GATTTCAGGC
TCACTGTTTG ATTTCGCACT GTATTTCTAC CACAACTATC GCCAACTTTT GGCCAAGGGC
AGTGGTCCAT ACTTTTATAT TCCTAAGTTA GAAAGTCATG TTGAAGCGCG CTGGTGGGCA
AAAGTATTTG CTTTTGTTGA GGAAAGGTTT TGTCTGCAAG CGGGCACGAT TAAATGTACT
TGCCTGATCG AGACGTTACC GGCCGTGTTC GAAATGGACG AAATCCTCTA TGAGCTGCGT
TCCAATATCG TCGCGCTGAA CTGTGGTCGC TGGGATTACA TCTTCAGCTA TATCAAAACA
TTAAAGCGTC ATAGCGACCG AGTCTTACCG GATCGCCAAG CCGTCACTAT GGATACGCCT
TTCTTAAGCG CTTATTCAAG ACTCTTGATT AAGACCTGCC ACAAACGCGG TGCGTTAGCG
ATGGGCGGCA TGGCGGCCTT TATTCCAGCC AAAGATCCGG TTCAGAACGA AGCGGTATTG
CAACGAGTTC GTCGAGATAA AGAACTGGAG GCGCGTAACG GCCACGATGG CACTTGGGTG
GCACACCCTG GTCTTGCCGA TACCGCTATG GGTATTTTCA ACGAATACAT AGGCCAAGAT
CACTGTAATC AATTGCATAT TACCCGTGAT GTCGATGCGC CAATCCTGGC TAGCGAACTG
CTTAAAACCT GCGATGGTGA GCGCACCGAA CAGGGGATGC GTCTGAACAT TCGTATCGCA
CTGCAGTATT TAGAGGCGTG GATCAGCGGC AACGGTTGCG TACCTATTTA CGGCTTAATG
GAAGATGCAG CTACGGCTGA GATTTCTAGA GCTTCAATTT GGCAATGGAT CCAACACGGT
AAGTCGCTGT CAAACGGCAA ACTCGTGACC AAGCAACTTT TTAAAGACAT GTTGGTTGAA
GAGCTGTCGA ACGTGAAAAA AGAAGTGGGT AGCGACAGAT TCACCCATGG CAAATTCACC
CAAGCGGCGG TATTGCTCGA AGACATTACC ACCTCCGACG AGCTGGTCGA TTTCTTAACC
TTACCCGGTT ACGAAATGCT GACTGCCTAG
|
|---|
| Protein sequence | MTEHTLSEQQ LNSTLGKATA NATLNIVGRD IPGQEVIFTE GAVALLESLC REFADEVPAL
LAKRKDKQAR IDKGSLPDFL PETRAIRDGA WQIRGIPDDL LDRRVEITGP VERKMVINAL
NANAKVFMAD FEDSLAPSWE KVVEGQINLR DAVRGDIEYT APDTGKHYKL GPNPAVLICR
VRGLHLKEKH VQFNGKAISG SLFDFALYFY HNYRQLLAKG SGPYFYIPKL ESHVEARWWA
KVFAFVEERF CLQAGTIKCT CLIETLPAVF EMDEILYELR SNIVALNCGR WDYIFSYIKT
LKRHSDRVLP DRQAVTMDTP FLSAYSRLLI KTCHKRGALA MGGMAAFIPA KDPVQNEAVL
QRVRRDKELE ARNGHDGTWV AHPGLADTAM GIFNEYIGQD HCNQLHITRD VDAPILASEL
LKTCDGERTE QGMRLNIRIA LQYLEAWISG NGCVPIYGLM EDAATAEISR ASIWQWIQHG
KSLSNGKLVT KQLFKDMLVE ELSNVKKEVG SDRFTHGKFT QAAVLLEDIT TSDELVDFLT
LPGYEMLTA
|
|---|
| |