| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1313 |
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| Symbol | |
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| ID | 4843183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 1491046 |
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| End bp | 1492791 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640118533 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001049700 |
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| Protein GI | 126173551 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.386041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTTAA TGGCTGCAAC TATCAATTTT GATGAGGCGT TAGCAGAGCT GGAGCAACTA
CAACATACCG ATCTACCCAG CGCTATTACT AAGCTCCATG AACTTGAAGC TGATTTCGAG
CATATGACGC GCTTTCAACA AGGGCGCTTA TTGGTATTTA AAGGGACTTC ATTTATTTAT
GCAGGTCAAT ATCAAGAAGC CCTAGTGACT TTAATTCAAT CTGAAAATTT AGTTCAAAAT
AGCGATTATT TATTTTCTGC CTATAGCTAT GAGGCAACAG CTTACATCGC CCTTAGGAAC
TTTAAAGACG CTTTTGTTGT AATGAGCAAA AGCCTAGGGT TAATAGATCG AATAGAAAAC
ATAGACATCA AACGTGCTGC ATATCTACGT TTAGCCAGTT TATACTCTGC AATGGGTATT
AAGGAAGAGG TGGGAAGCTA CGCGGCTAAG GCAGAATCGC TTGCTTCTGC AGATGATGTA
AAAGATATCT GTACTGCAAA GTTGTATTTA TCTGTTTATC AATTAGAGCT AGAGGCCTTT
ACTAAGGCGT TTGATGAATT CCAGTACACA CATGATTTTT TTGAGTCTAA TGGCTTCCCA
TTGATTTCGT TTATTGCATT GAAAGGGATG GGTGAGTCTA AGTTAAGGTT GCAAGAATAC
TCTGCTGCAG TTGCTTTACT TTTGAAAGCA TTAAAGGGAT ATGAGTCTTT TAATTTTCAA
CTAGAAATTA ATAGTGTCCA TTCTTTGTTA ACCGAAGCGT ATTTTGCACT AAAGCAATCT
GCTGAGGTGG TCGAGCATGC CAAGTTCGTT ACGTCATTAC CTAATGATCC TAGTTATACC
GAGTTAAAAC ATACTGTCTT TAAAGTGTTA GCGGGCTTAA ATGCTGAGAA TAAACAATTT
GAACAAGCCT ATGAGTTCTC GAAAAAAGAG CAGTATTACA ATCAGCTGAT GTTTGATGAA
GCGAAAATGA AAACGTTAGC GTATCAGGCG GCAAAGTTTA ATGCTGATGA ACAGTCACGT
GAAATTAATT TATTGAATAA GGAACGTGAA CTGTATGTCG CTCAGCAAAC GGTAAAAGAG
CGCGAATACA CCAATATGCT GATGTTTGTC ACTATTTTAG TGGGCGGGTT ATTTTTCCTC
GGGATTTTGT TAGCTGTAGG CCAGATGCAG AAACGCAAGT TTATGCGTAT GGCGAGAATG
GATGCATTGA CGGGCATCTT GAATCGCGGT GCAGGGCAAG AATTAGGGGA AAACCTTTTT
GTGCAAGCCA CGGCCCGCGG TGGGGATTTC TGTGTCATTT TATTTGATTT GGATTTCTTC
AAACGCATCA ACGATTCTTT TGGCCATGGA ACTGGCGATT GGGCGCTTAA AAAAGTGGTT
GACTCCCTTA AATCCCATAT CCGAAATGGT GATGTTTTTG CTCGTATCGG CGGTGAGGAG
TTTGCGATTT TATTACCCTA TGCCGATGAA GAGAAAGGTA TGGAAGTGGC AGAGCAGTGC
CGAGCCCGTA TCGAGGCCAT TGATACCCAA CATTCAGGAC ATAAGTTCGT CATTACGGCG
AGTTTTGGCG TGAGCGGTTT AATGGCTGAT GATCTGAGTT TGGACCCATT ATTTCACCGA
GCCGACATGG CGCTTTATGC CGCTAAGGCC AATGGCCGTA ATGCCGTAGT ACGCTATTCT
GACATCTTAA AATGTGACAA GCAGGCAACT GATTTACGGC GTCATATCGC ATCGCCCTCG
GTGTAA
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| Protein sequence | MPLMAATINF DEALAELEQL QHTDLPSAIT KLHELEADFE HMTRFQQGRL LVFKGTSFIY
AGQYQEALVT LIQSENLVQN SDYLFSAYSY EATAYIALRN FKDAFVVMSK SLGLIDRIEN
IDIKRAAYLR LASLYSAMGI KEEVGSYAAK AESLASADDV KDICTAKLYL SVYQLELEAF
TKAFDEFQYT HDFFESNGFP LISFIALKGM GESKLRLQEY SAAVALLLKA LKGYESFNFQ
LEINSVHSLL TEAYFALKQS AEVVEHAKFV TSLPNDPSYT ELKHTVFKVL AGLNAENKQF
EQAYEFSKKE QYYNQLMFDE AKMKTLAYQA AKFNADEQSR EINLLNKERE LYVAQQTVKE
REYTNMLMFV TILVGGLFFL GILLAVGQMQ KRKFMRMARM DALTGILNRG AGQELGENLF
VQATARGGDF CVILFDLDFF KRINDSFGHG TGDWALKKVV DSLKSHIRNG DVFARIGGEE
FAILLPYADE EKGMEVAEQC RARIEAIDTQ HSGHKFVITA SFGVSGLMAD DLSLDPLFHR
ADMALYAAKA NGRNAVVRYS DILKCDKQAT DLRRHIASPS V
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