Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1293 |
Symbol | |
ID | 4844313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 1476243 |
End bp | 1476734 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640118512 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001049680 |
Protein GI | 126173531 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.616877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAT TCAAGCAGTC GTTATTAGCC ATGGGATTGT CAGGCGTATT ACTCACTGGC GGCGTACTCG TCGCTCAGCA AGAGGGGCTA GTGCTTGGGA CTTACGTTGA CCCTGTTGGA ATTGTAACGG CCTGCTTCGG TAAGACTGGG CCTGAGTTCG AGCTAGGGCA GCGCTTTAGC GAGCAAGAAT GTCTGGCGAT GTTAGCTGAT GATTTAGAAG TATTCGATCG CCAATTAACG AATCAAGTAC GTGTGCCTAT CACCGATAGC GAACGCGCTG CTTACCTCAG TTTTATGTAC AACGTTGGCG CACAGAACTT TAGTGATTCA ACACTGCGAA AAAAGTTACT GCATGGCGAC CGTATTGGCG CGTGCAATGA GCTAAGCCGC TGGGTTTATG CCAAAGGCAA GAAACTCCAA GGGCTTGTTA ACCGCCGTGA AGCTGAACGG CAACTTTGTT TAAAGGAACT AAAGCATGTT TCAAACCATT AA
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Protein sequence | MNKFKQSLLA MGLSGVLLTG GVLVAQQEGL VLGTYVDPVG IVTACFGKTG PEFELGQRFS EQECLAMLAD DLEVFDRQLT NQVRVPITDS ERAAYLSFMY NVGAQNFSDS TLRKKLLHGD RIGACNELSR WVYAKGKKLQ GLVNRREAER QLCLKELKHV SNH
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