Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1266 |
Symbol | |
ID | 4842177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 1455854 |
End bp | 1456801 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640118485 |
Product | integrase catalytic subunit |
Protein accession | YP_001049653 |
Protein GI | 126173504 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.705785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTACC AGCAGCTAAC TGAGGGGCAA CGATACCAGA TTGCCCTGCT TTATAAAGAG AATTGTAGTT GTCGTGAGAT TGGGCAGCGG GTCGGGGTCA GTAAATCTAC GATTTCCCGT GAACTCAGGC GCAATGGTAC AACAGCGGGT TATGTTGCGC AGCATGCTCA TAGTCAGTGT GAGCAGCGAC GGGGTGTGGC AGCAAAGCGG TCTGTAAGCC AGAGTACCAT TGAGTTTGTT GAGTTTGCTC TGGAGTGGAA GTGGAGCCCT GAGCAGATAA GTGCTGTGGC AAAATTGATT GGTCTTTCGG TCAGTCATGA GTGGATTTAT CAGTATGTCT TTGCGAATAA ATCTCGTGGT GGCGTTCTGT ATGAACATCT CAGGCAAGGT AAGCGTCGTT ATCGCAAAGG GTATGGGCAG AAGCGAGGAG GTATCCCTGA CGCGGTTTCC ATAGAGCTAC GCCCTGCTAT TGTTGATGAG CGTGCTCGCC TTGGGGACTG GGAGGCCTAC CTGGTGCTGG GTAAACAGGG AACCGGTGCA ATCGTCACGC TGGCTGAGCG TAAGAGTCGA ATTTATCTGA CAAAAAAAGT TTTTTCAAAG GATGCGATGG AGGTCAGCAA AGCGATTATC TCAATGTTGA GTGACTACAA GGATGCGTGC CACACGATAA CCTTCGACAA TGGTCGTGAG TTCAGCGAGC ACAAGGTGAT AGCGGAGGCA CTGGAGGCGG AGATGTATTT TGCCCATCCC TACTCGTCGC AGGAGCGTGG GCTCAACGAG AACACGAACG GACTTCTGCG GCAGTTTATC CCTAAAGGAA CAGATCTCAG AACAGTGTCA GATGAGGACT TACAGCGCTA TCAGGGCGCA CTGAACAGCA GGCCACGTAA GTGCCTAGGG TTCAGACAAC CTTCGGTGGT GTTTGCAGAG CTAAGAAAGG CGGCCTAG
|
Protein sequence | MNYQQLTEGQ RYQIALLYKE NCSCREIGQR VGVSKSTISR ELRRNGTTAG YVAQHAHSQC EQRRGVAAKR SVSQSTIEFV EFALEWKWSP EQISAVAKLI GLSVSHEWIY QYVFANKSRG GVLYEHLRQG KRRYRKGYGQ KRGGIPDAVS IELRPAIVDE RARLGDWEAY LVLGKQGTGA IVTLAERKSR IYLTKKVFSK DAMEVSKAII SMLSDYKDAC HTITFDNGRE FSEHKVIAEA LEAEMYFAHP YSSQERGLNE NTNGLLRQFI PKGTDLRTVS DEDLQRYQGA LNSRPRKCLG FRQPSVVFAE LRKAA
|
| |