Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1245 |
Symbol | |
ID | 4844465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 1431368 |
End bp | 1432090 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640118464 |
Product | hypothetical protein |
Protein accession | YP_001049632 |
Protein GI | 126173483 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCAGAG CATATCAAAA CAAGAAAGAA TCCATGGCGA AAACAGCCGG TCAAAAAACC CGCATTTATT CACGCTACGG TAAAGAGATT TACGTTGTCG CTAAACAAGG CGGCGTTGAG CCCGATGGAA ACTTATCACT GCGTCGCTTG ATTGAACGCG CGAAGAAAGA CCAAGTGCCT GCGCATGTTA TTGAACGCGC AATTGAAAAA GCCAAAGGCG GCGGTGGTGA AGATTACGAT ACCGCCCGTT ACGAAGGTTT TGGTCCTGGC AACTGCATGG TCATTGTTGA CTGCTTAACC GATAACGTAA AACGTACCTT CACCGAAGTG CGTCAAGCCT TCGTGAAAAA CGATGCCAAA CTCGGCGGCC CAGGTACAGT TGGCCACATG TTTGATCATC AAGCCGTGTT CGTGTTTGCC GGTGATGACG AAGATGCGAT TTTAGAACTG CTGATGATGG CTGACGTTGA TGTGAGCGAT GTTGAGCTGG AAGATGGCTT AATCACAGTT TATGCGCCGC ACACTGAATA CTTTAAAGTT AAAACTGCAC TGACCGAAGC AATGCCAGAA GTTAACTTCG AATTCGATAA CATTACCTTC GTACCGCAGG ACATGACTAA GGTTGAAGGT GAAGATGTGG CCATGTTTGA AAAGTTTATC GCCGCTTTAG AAGATTGTGA CGACGTACAA AACGTCTATC ACAATGCGGA AATTGAAGAC TAA
|
Protein sequence | MGRAYQNKKE SMAKTAGQKT RIYSRYGKEI YVVAKQGGVE PDGNLSLRRL IERAKKDQVP AHVIERAIEK AKGGGGEDYD TARYEGFGPG NCMVIVDCLT DNVKRTFTEV RQAFVKNDAK LGGPGTVGHM FDHQAVFVFA GDDEDAILEL LMMADVDVSD VELEDGLITV YAPHTEYFKV KTALTEAMPE VNFEFDNITF VPQDMTKVEG EDVAMFEKFI AALEDCDDVQ NVYHNAEIED
|
| |