Gene Sbal_1211 details

Gene Information

• Locus tag: Sbal_1211
• Symbol: rimM
• ID: 4842736
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 1392205
• End bp: 1392735
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640118430
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_001049598
• Protein GI: 126173449
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000458928
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAGTA ACCAACAGCC AGTCGTACTG GGGAAATTAG GCTCCTGTCA TGGCATTAAA 
GGTTGGCTGA AAATCACCGC CTATACCGAT TCTGTTGAAG GTATCTTTGA CTACTCGCCT 
TGGCTTATTA AAGAAAATGG TGAGTGGCGC GAAATAAAGG TCACCCAGTG GCGTTATCAA 
GGCAAGGCCG TTGTTGCCTT ACTTGATGGC GTAGAAACAC GGGAGCAAGC GCAAATGCTC 
ACAAATTGTG AGATTGCGAT TTTGCCGGAA CAGATGAACG ATTTGCCAGC AGATGAATTC 
TACTGGCGTG ATCTCATCGG TTGCGAAGTG GTCAATACAA CTGGCTATAA CATGGGAATT 
GTCGATCAGA TCGTGGAAAC AGGATCGAAC GACGTATTAC TCGTTAAAGC CAACGCTAAA 
GATAGTTTCG GCAAAGTGGA ACGTATGATC CCCTTTGTCC CTGAGCAGTT CATCAAAACG 
GTGGACCTGC AAGGTAAACA GATTTTAGTG GATTGGGATC CTGACTTCTA A 

 

Protein sequence

MSSNQQPVVL GKLGSCHGIK GWLKITAYTD SVEGIFDYSP WLIKENGEWR EIKVTQWRYQ 
GKAVVALLDG VETREQAQML TNCEIAILPE QMNDLPADEF YWRDLIGCEV VNTTGYNMGI 
VDQIVETGSN DVLLVKANAK DSFGKVERMI PFVPEQFIKT VDLQGKQILV DWDPDF